Difference between revisions of "GLYOXYLATE-BYPASS"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.11.2-RXN 2.7.11.2-RXN] == * direction: ** REVERSIBLE * common name: ** pyruvate_dehydrogenase_k...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.11.2-RXN 2.7.11.2-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
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* direction:
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* taxonomic range:
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** REVERSIBLE
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
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** pyruvate_dehydrogenase_kinase
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** glyoxylate cycle
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** pyruvate_dehydrogenasekinase
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.11.2 EC-2.7.11.2]
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* Synonym(s):
 
* Synonym(s):
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** glyoxylate bypass
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** glyoxylate shunt
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''6''' reactions found over '''6''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[Pyruvate-dehydrogenases]][c] '''<=>''' 1 [[Phosphorylated-pyruvate-dehydrogenases]][c] '''+''' 1 [[ADP]][c]
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* [[ACONITATEDEHYDR-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 a pyruvate dehydrogenase[c] '''<=>''' 1 a phosphorylated pyruvate dehydrogenase[c] '''+''' 1 ADP[c]
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*** [[Tiso_gene_13007]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[annotation-in-silico_annotation]]
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* [[Tiso_gene_20269]]
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*** [[orthology-synechocystis]]
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** EXPERIMENTAL_ANNOTATION
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* [[ACONITATEHYDR-RXN]]
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***AUTOMATED-NAME-MATCH
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** 1 associated gene(s):
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* [[Tiso_gene_12579]]
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*** [[Tiso_gene_13007]]
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** IN-SILICO_ANNOTATION
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** 2 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-in-silico_annotation]]
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** [[pantograph]]-[[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[Tiso_gene_20270]]
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* [[CITSYN-RXN]]
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** IN-SILICO_ANNOTATION
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** 4 associated gene(s):
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***AUTOMATED-NAME-MATCH
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*** [[Tiso_gene_18030]]
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== Pathways  ==
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*** [[Tiso_gene_9601]]
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== Reconstruction information  ==
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*** [[Tiso_gene_9603]]
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* [[orthology]]:
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*** [[Tiso_gene_9602]]
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** [[pantograph]]:
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** 3 reconstruction source(s) associated:
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*** [[esiliculosus]]
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*** [[annotation-experimental_annotation]]
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* [[annotation]]:
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*** [[manual-primary_network]]
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** [[pathwaytools]]:
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*** [[annotation-in-silico_annotation]]
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*** [[experimental_annotation]]
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* [[ISOCIT-CLEAV-RXN]]
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*** [[in-silico_annotation]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14008]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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* [[MALATE-DEH-RXN]]
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** 2 associated gene(s):
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*** [[Tiso_gene_2323]]
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*** [[Tiso_gene_1990]]
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** 7 reconstruction source(s) associated:
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*** [[annotation-experimental_annotation]]
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*** [[orthology-esiliculosus]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** [[orthology-synechocystis]]
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*** [[manual-primary_network]]
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*** [[orthology-creinhardtii]]
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* [[MALSYN-RXN]]
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** 1 associated gene(s):
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*** [[Tiso_gene_14377]]
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** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* ECOCYC:
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** [http://www.genome.jp/dbget-bin/www_bget?R03449 R03449]
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** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: direction=REVERSIBLE}}
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* METACYC:
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{{#set: common name=pyruvate_dehydrogenase_kinase}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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{{#set: common name=pyruvate_dehydrogenasekinase}}
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{{#set: taxonomic range=TAX-2157}}
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{{#set: ec number=EC-2.7.11.2}}
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{{#set: taxonomic range=TAX-2759}}
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{{#set: gene associated=Tiso_gene_20269|Tiso_gene_12579|Tiso_gene_20270}}
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{{#set: taxonomic range=TAX-2}}
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{{#set: in pathway=}}
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{{#set: common name=glyoxylate cycle}}
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{{#set: reconstruction category=orthology}}
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{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reaction found=6}}
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{{#set: reconstruction source=esiliculosus}}
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{{#set: total reaction=6}}
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{{#set: reconstruction category=annotation}}
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{{#set: completion rate=100.0}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:16, 21 March 2018

Pathway GLYOXYLATE-BYPASS

  • taxonomic range:
  • common name:
    • glyoxylate cycle
  • Synonym(s):
    • glyoxylate bypass
    • glyoxylate shunt

Reaction(s) found

6 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links





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