Difference between revisions of "Tiso gene 3260"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] == * smiles: *...")
(Created page with "Category:Gene == Gene Tiso_gene_3260 == * right end position: ** 11548 * transcription direction: ** NEGATIVE * left end position: ** 10034 * centisome position: ** 58.520...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
[[Category:Metabolite]]
+
[[Category:Gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE] ==
+
== Gene Tiso_gene_3260 ==
* smiles:
+
* right end position:
** C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)
+
** 11548
* inchi key:
+
* transcription direction:
** InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M
+
** NEGATIVE
* common name:
+
* left end position:
** 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine
+
** 10034
* molecular weight:
+
* centisome position:
** 312.196    
+
** 58.520935    
 
* Synonym(s):
 
* Synonym(s):
** 5-phosphoribosyl-N-formylglycineamidine
 
** 5'-phosphoribosyl-N-formyl glycineamidine
 
** FGAM
 
** 5'-phosphoribosylformylglycinamidine
 
  
== Reaction(s) known to consume the compound ==
+
== Reactions associated ==
* [[AIRS-RXN]]
+
* Reaction: [[1.2.1.25-RXN]]
== Reaction(s) known to produce the compound ==
+
** Source: [[annotation-experimental_annotation]]
* [[FGAMSYN-RXN]]
+
*** Assignment: automated-name-match
== Reaction(s) of unknown directionality ==
+
* Reaction: [[1.2.4.4-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[2.3.1.168-RXN]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[2KETO-3METHYLVALERATE-RXN]]
 +
** Source: [[orthology-creinhardtii]]
 +
* Reaction: [[KETOISOCAPROATE-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[METHYLVALERATE-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-7719]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-5046]]
 +
* [[VALDEG-PWY]]
 +
* [[ILEUDEG-PWY]]
 +
* [[PWY-5108]]
 
== External links  ==
 
== External links  ==
* LIGAND-CPD:
+
{{#set: right end position=11548}}
** [http://www.genome.jp/dbget-bin/www_bget?C04640 C04640]
+
{{#set: transcription direction=NEGATIVE}}
* CHEBI:
+
{{#set: left end position=10034}}
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=18413 18413]
+
{{#set: centisome position=58.520935   }}
* BIGG : fpram
+
{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|2KETO-3METHYLVALERATE-RXN|KETOISOCAPROATE-RXN|METHYLVALERATE-RXN|RXN-7719}}
* PUBCHEM:
+
{{#set: pathway associated=PWY-5046|VALDEG-PWY|ILEUDEG-PWY|PWY-5108}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=90657386 90657386]
+
* HMDB : HMDB06211
+
{{#set: smiles=C(NC=O)C(=[N+])NC1(C(O)C(O)C(COP([O-])(=O)[O-])O1)}}
+
{{#set: inchi key=InChIKey=PMCOGCVKOAOZQM-XVFCMESISA-M}}
+
{{#set: common name=2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine}}
+
{{#set: molecular weight=312.196   }}
+
{{#set: common name=5-phosphoribosyl-N-formylglycineamidine|5'-phosphoribosyl-N-formyl glycineamidine|FGAM|5'-phosphoribosylformylglycinamidine}}
+
{{#set: consumed by=AIRS-RXN}}
+
{{#set: produced by=FGAMSYN-RXN}}
+

Latest revision as of 19:55, 21 March 2018

Gene Tiso_gene_3260

  • right end position:
    • 11548
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 10034
  • centisome position:
    • 58.520935
  • Synonym(s):

Reactions associated

Pathways associated

External links