Difference between revisions of "Tiso gene 18774"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-isopropylmalate dehydroge...")
(Created page with "Category:Gene == Gene Tiso_gene_18774 == * right end position: ** 2211 * transcription direction: ** NEGATIVE * left end position: ** 412 * centisome position: ** 14.69329...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14986 RXN-14986] ==
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== Gene Tiso_gene_18774 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 2211
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* common name:
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* transcription direction:
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** 3-isopropylmalate dehydrogenase
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/1.1.1.85 EC-1.1.1.85]
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** 412
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* centisome position:
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** 14.693296   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.1.1.145-RXN]]
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** 1 [[NAD]][c] '''+''' 1 [[CPD-1130]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-3618]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: ec-number
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** 1 NAD+[c] '''+''' 1 3-ethylmalate[c] '''=>''' 1 NADH[c] '''+''' 1 2-oxovalerate[c] '''+''' 1 CO2[c]
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* Reaction: [[RXN-12693]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: ec-number
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12747]]
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* [[Tiso_gene_2920]]
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12789]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[PWY-7396]], butanol and isobutanol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7396 PWY-7396]
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* Reaction: [[RXN66-342]]
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** '''4''' reactions found over '''8''' reactions in the full pathway
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** Source: [[annotation-in-silico_annotation]]
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== Reconstruction information  ==
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*** Assignment: ec-number
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* Category: [[orthology]]
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* Reaction: [[RXN66-350]]
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** Source: [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pantograph]]
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*** Assignment: ec-number
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* Category: [[annotation]]
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* Reaction: [[RXN66-353]]
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** Source: [[annotation-experimental_annotation]]
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** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
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== Pathways associated ==
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* [[PWY66-378]]
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* [[PWY-7299]]
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* [[PWY-6948]]
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* [[PWY-6946]]
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* [[PWY-6944]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=2211}}
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{{#set: common name=3-isopropylmalate dehydrogenase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-1.1.1.85}}
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{{#set: left end position=412}}
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{{#set: gene associated=Tiso_gene_2920}}
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{{#set: centisome position=14.693296    }}
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{{#set: in pathway=PWY-7396}}
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{{#set: reaction associated=1.1.1.145-RXN|RXN-12693|RXN-12747|RXN-12789|RXN66-342|RXN66-350|RXN66-353}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: pathway associated=PWY66-378|PWY-7299|PWY-6948|PWY-6946|PWY-6944}}
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{{#set: reconstruction source=annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:20, 21 March 2018

Gene Tiso_gene_18774

  • right end position:
    • 2211
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 412
  • centisome position:
    • 14.693296
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_18774&oldid=47922"