Difference between revisions of "Tiso gene 2693"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] == * direction: ** REVERSIBLE * common name: ** hexanoyl-CoA C-acyltransferase...")
 
(Created page with "Category:Gene == Gene Tiso_gene_2693 == * right end position: ** 9322 * transcription direction: ** POSITIVE * left end position: ** 5729 * centisome position: ** 30.83589...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14277 RXN-14277] ==
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== Gene Tiso_gene_2693 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 9322
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* common name:
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* transcription direction:
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** hexanoyl-CoA C-acyltransferase
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** POSITIVE
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** thiolase
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* left end position:
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** acetyl-_c-acetyltransferase
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** 5729
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** 3-ketoacyl-_thiolase
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* centisome position:
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* ec number:
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** 30.835892   
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDLIPACETRANS-RXN]]
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** 1 [[HEXANOYL-COA]][c] '''+''' 1 [[ACETYL-COA]][c] '''<=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD0-2106]][c]
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** Source: [[orthology-creinhardtii]]
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* With common name(s):
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* Reaction: [[PYRUVDEH-RXN]]
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** 1 hexanoyl-CoA[c] '''+''' 1 acetyl-CoA[c] '''<=>''' 1 coenzyme A[c] '''+''' 1 3-oxooctanoyl-CoA[c]
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** Source: [[orthology-athaliana]]
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** Source: [[orthology-athaliana]]
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== Genes associated with this reaction  ==
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** Source: [[orthology-esiliculosus]]
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-12508]]
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* [[Tiso_gene_17451]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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* Reaction: [[RXN-12583]]
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* [[Tiso_gene_3856]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_16181]]
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*** Assignment: ec-number
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** [[pantograph]]-[[athaliana]]
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* Reaction: [[RXN0-1133]]
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** [[pantograph]]-[[esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[Tiso_gene_10116]]
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*** Assignment: automated-name-match
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** IN-SILICO_ANNOTATION
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* Reaction: [[RXN0-1134]]
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***EC-NUMBER
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** Source: [[annotation-in-silico_annotation]]
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** EXPERIMENTAL_ANNOTATION
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*** Assignment: ec-number
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***EC-NUMBER
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** Source: [[annotation-experimental_annotation]]
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* [[Tiso_gene_3855]]
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*** Assignment: ec-number
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** IN-SILICO_ANNOTATION
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== Pathways associated ==
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***EC-NUMBER
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* [[PYRUVDEHYD-PWY]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-7218]]
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***EC-NUMBER
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* [[PWY-7384]]
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* [[Tiso_gene_15327]]
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* [[PWY-6886]]
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** EXPERIMENTAL_ANNOTATION
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* [[PWY-5537]]
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***EC-NUMBER
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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== Pathways ==
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* [[PWY-5482]]
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[athaliana]]
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*** [[esiliculosus]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=9322}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=31205 31205]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5729}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04747 R04747]
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{{#set: centisome position=30.835892    }}
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{{#set: direction=REVERSIBLE}}
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{{#set: reaction associated=DIHYDLIPACETRANS-RXN|PYRUVDEH-RXN|RXN-12508|RXN-12583|RXN0-1133|RXN0-1134}}
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{{#set: common name=hexanoyl-CoA C-acyltransferase}}
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{{#set: pathway associated=PYRUVDEHYD-PWY|PWY-7218|PWY-7384|PWY-6886|PWY-5537|GLYCOLYSIS-TCA-GLYOX-BYPASS|PWY-5482}}
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{{#set: common name=thiolase}}
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{{#set: common name=acetyl-_c-acetyltransferase}}
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{{#set: common name=3-ketoacyl-_thiolase}}
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: gene associated=Tiso_gene_17451|Tiso_gene_3856|Tiso_gene_16181|Tiso_gene_10116|Tiso_gene_3855|Tiso_gene_15327}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=athaliana|esiliculosus}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 21:21, 21 March 2018

Gene Tiso_gene_2693

  • right end position:
    • 9322
  • transcription direction:
    • POSITIVE
  • left end position:
    • 5729
  • centisome position:
    • 30.835892
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_2693&oldid=48119"