Difference between revisions of "PWY-6969"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5514 RXN0-5514] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-acylglycerol-3-phosphate...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5514 RXN0-5514] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
−
** 1-acylglycerol-3-phosphate O-acyltransferase
+
** TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
−
** 1-acylglycerol-3-phosphate_o-acyltransferase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.3.1.51 EC-2.3.1.51]
+
 
* Synonym(s):
 
* Synonym(s):
 +
** citric acid cycle
 +
** tricarboxylic acid cycle
 +
** Szent-Gyorgyi-Krebs cycle
 +
** Krebs cycle
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''12''' reactions in the full pathway
−
** 1 [[Saturated-2-Lysophosphatidates]][c] '''+''' 1 [[Saturated-Fatty-Acyl-ACPs]][c] '''=>''' 1 [[ACP]][c] '''+''' 1 [[2-3-4-Saturated-L-Phosphatidates]][c]
+
* [[ACONITATEDEHYDR-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 a 2,3,4-saturated 2-lysophosphatidate[c] '''+''' 1 a 2,3,4-saturated fatty acyl-[acp][c] '''=>''' 1 a holo-[acyl-carrier protein][c] '''+''' 1 a 1,2-diacyl-sn-glycerol 3-phosphate[c]
+
*** [[Tiso_gene_13007]]
−
 
+
** 3 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_13959]]
+
*** [[orthology-synechocystis]]
−
** IN-SILICO_ANNOTATION
+
* [[ACONITATEHYDR-RXN]]
−
***EC-NUMBER
+
** 1 associated gene(s):
−
** EXPERIMENTAL_ANNOTATION
+
*** [[Tiso_gene_13007]]
−
***EC-NUMBER
+
** 2 reconstruction source(s) associated:
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[annotation-in-silico_annotation]]
−
== Pathways  ==
+
*** [[annotation-experimental_annotation]]
−
== Reconstruction information  ==
+
* [[CITSYN-RXN]]
−
* [[orthology]]:
+
** 4 associated gene(s):
−
** [[pantograph]]:
+
*** [[Tiso_gene_18030]]
−
*** [[esiliculosus]]
+
*** [[Tiso_gene_9601]]
−
* [[annotation]]:
+
*** [[Tiso_gene_9603]]
−
** [[pathwaytools]]:
+
*** [[Tiso_gene_9602]]
−
*** [[experimental_annotation]]
+
** 3 reconstruction source(s) associated:
−
*** [[in-silico_annotation]]
+
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_3691]]
 +
*** [[Tiso_gene_6720]]
 +
** 6 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[ISOCIT-CLEAV-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_14008]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[ISOCITDEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_18262]]
 +
*** [[Tiso_gene_10809]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_2323]]
 +
*** [[Tiso_gene_1990]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
* [[MALSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_14377]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Tiso_gene_15846]]
 +
*** [[Tiso_gene_11866]]
 +
** 7 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-athaliana]]
 +
*** [[orthology-synechocystis]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=2-OXOGLUTARATE-SYNTHASE-RXN 2-OXOGLUTARATE-SYNTHASE-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-12912 RXN-12912]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14971 RXN-14971]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: common name=1-acylglycerol-3-phosphate O-acyltransferase}}
+
{{#set: taxonomic range=TAX-3035}}
−
{{#set: common name=1-acylglycerol-3-phosphate_o-acyltransferase}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: ec number=EC-2.3.1.51}}
+
{{#set: taxonomic range=TAX-201174}}
−
{{#set: gene associated=Tiso_gene_13959}}
+
{{#set: common name=TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)}}
−
{{#set: in pathway=}}
+
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: reaction found=9}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: total reaction=12}}
−
{{#set: reconstruction source=esiliculosus}}
+
{{#set: completion rate=75.0}}
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Latest revision as of 19:32, 21 March 2018

Pathway PWY-6969

  • taxonomic range:
  • common name:
    • TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase)
  • Synonym(s):
    • citric acid cycle
    • tricarboxylic acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

9 reactions found over 12 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6969&oldid=42224"