Difference between revisions of "PWY-6309"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
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** ORF
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** L-tryptophan degradation XI (mammalian, via kynurenine)
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* ec number:
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** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''9''' reactions found over '''17''' reactions in the full pathway
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** 1 [[TDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[TMP]][c] '''+''' 1 [[Pi]][c]
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* [[1.13.11.6-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 dTDP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 dTMP[c] '''+''' 1 phosphate[c]
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*** [[Tiso_gene_10922]]
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** 1 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[annotation-experimental_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[2.6.1.7-RXN]]
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* [[Tiso_gene_20236]]
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** 1 associated gene(s):
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** [[pantograph]]-[[esiliculosus]]
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*** [[Tiso_gene_15680]]
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* [[Tiso_gene_12899]]
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** 1 reconstruction source(s) associated:
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** IN-SILICO_ANNOTATION
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*** [[orthology-esiliculosus]]
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***EC-NUMBER
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* [[3-HYDROXY-KYNURENINASE-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** 2 associated gene(s):
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***EC-NUMBER
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*** [[Tiso_gene_10685]]
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** [[pantograph]]-[[creinhardtii]]
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*** [[Tiso_gene_10684]]
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-in-silico_annotation]]
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* Category: [[orthology]]
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* [[ARYLFORMAMIDASE-RXN]]
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** Source: [[orthology-creinhardtii]]
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** 1 associated gene(s):
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*** Tool: [[pantograph]]
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*** [[Tiso_gene_16921]]
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** Source: [[orthology-esiliculosus]]
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** 1 reconstruction source(s) associated:
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*** Tool: [[pantograph]]
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*** [[orthology-creinhardtii]]
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* Category: [[annotation]]
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* [[KYNURENINASE-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 associated gene(s):
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*** Tool: [[pathwaytools]]
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*** [[Tiso_gene_10685]]
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** Source: [[annotation-experimental_annotation]]
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*** [[Tiso_gene_10684]]
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*** Tool: [[pathwaytools]]
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** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
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* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
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** 3 associated gene(s):
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*** [[Tiso_gene_14398]]
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*** [[Tiso_gene_6196]]
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*** [[Tiso_gene_15790]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-in-silico_annotation]]
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*** [[orthology-esiliculosus]]
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* [[PWY-5651]]
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** 0 associated gene:
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* [[PWY-5652]]
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** 0 associated gene:
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* [[RXN-10721]]
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** 1 associated gene(s):
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*** [[Tiso_gene_15680]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-esiliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10720 RXN-10720]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10722 RXN-10722]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: taxonomic range=TAX-40674}}
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{{#set: common name=ORF}}
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{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
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{{#set: ec number=EC-3.6.1}}
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{{#set: reaction found=9}}
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{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
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{{#set: total reaction=17}}
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{{#set: in pathway=}}
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{{#set: completion rate=53.0}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}
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Latest revision as of 20:12, 21 March 2018

Pathway PWY-6309

  • taxonomic range:
  • common name:
    • L-tryptophan degradation XI (mammalian, via kynurenine)
  • Synonym(s):

Reaction(s) found

9 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6309&oldid=40184"