Difference between revisions of "PWY-6309"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] == * direction: ** LEFT-TO-RIGHT * common name: ** ORF * ec number: ** [http:/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14213 RXN-14213] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
−
** ORF
+
** L-tryptophan degradation XI (mammalian, via kynurenine)
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.6.1 EC-3.6.1]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''17''' reactions in the full pathway
−
** 1 [[TDP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[TMP]][c] '''+''' 1 [[Pi]][c]
+
* [[1.13.11.6-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 dTDP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 dTMP[c] '''+''' 1 phosphate[c]
+
*** [[Tiso_gene_10922]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[2.6.1.7-RXN]]
−
* [[Tiso_gene_20236]]
+
** 1 associated gene(s):
−
** [[pantograph]]-[[esiliculosus]]
+
*** [[Tiso_gene_15680]]
−
* [[Tiso_gene_12899]]
+
** 1 reconstruction source(s) associated:
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* [[3-HYDROXY-KYNURENINASE-RXN]]
−
** EXPERIMENTAL_ANNOTATION
+
** 2 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_10685]]
−
** [[pantograph]]-[[creinhardtii]]
+
*** [[Tiso_gene_10684]]
−
== Pathways  ==
+
** 1 reconstruction source(s) associated:
−
== Reconstruction information  ==
+
*** [[annotation-in-silico_annotation]]
−
* Category: [[orthology]]
+
* [[ARYLFORMAMIDASE-RXN]]
−
** Source: [[orthology-creinhardtii]]
+
** 1 associated gene(s):
−
*** Tool: [[pantograph]]
+
*** [[Tiso_gene_16921]]
−
** Source: [[orthology-esiliculosus]]
+
** 1 reconstruction source(s) associated:
−
*** Tool: [[pantograph]]
+
*** [[orthology-creinhardtii]]
−
* Category: [[annotation]]
+
* [[KYNURENINASE-RXN]]
−
** Source: [[annotation-in-silico_annotation]]
+
** 2 associated gene(s):
−
*** Tool: [[pathwaytools]]
+
*** [[Tiso_gene_10685]]
−
** Source: [[annotation-experimental_annotation]]
+
*** [[Tiso_gene_10684]]
−
*** Tool: [[pathwaytools]]
+
** 1 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
 +
** 3 associated gene(s):
 +
*** [[Tiso_gene_14398]]
 +
*** [[Tiso_gene_6196]]
 +
*** [[Tiso_gene_15790]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[PWY-5651]]
 +
** 0 associated gene:
 +
* [[PWY-5652]]
 +
** 0 associated gene:
 +
* [[RXN-10721]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_15680]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-esiliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10720 RXN-10720]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10722 RXN-10722]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-40674}}
−
{{#set: common name=ORF}}
+
{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
−
{{#set: ec number=EC-3.6.1}}
+
{{#set: reaction found=9}}
−
{{#set: gene associated=Tiso_gene_20236|Tiso_gene_12899}}
+
{{#set: total reaction=17}}
−
{{#set: in pathway=}}
+
{{#set: completion rate=53.0}}
−
{{#set: reconstruction category=orthology|annotation}}
+
−
{{#set: reconstruction source=orthology-creinhardtii|annotation-in-silico_annotation|annotation-experimental_annotation|orthology-esiliculosus}}
+
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Latest revision as of 19:12, 21 March 2018

Pathway PWY-6309

  • taxonomic range:
  • common name:
    • L-tryptophan degradation XI (mammalian, via kynurenine)
  • Synonym(s):

Reaction(s) found

9 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=PWY-6309&oldid=40184"