Difference between revisions of "Annotation-experimental annotation"

Latest revision as of 20:26, 21 March 2018

	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
1-ACYLGLYCEROL-3-P-ACYLTRANSFER-RXN	EC-2.3.1.51	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 13959	PWY0-1319 PWY-5981
1-PHOSPHATIDYLINOSITOL-KINASE-RXN	EC-2.7.1.67	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 18530 Tiso gene 2572 Tiso gene 12389 Tiso gene 18529 Tiso gene 17239 Tiso gene 17238 Tiso gene 17240	PWY-6352 PWY-6351
1.1.1.211-RXN	EC-1.1.1.211	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 14262
1.1.1.271-RXN	EC-1.1.1.271	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 16970	PWY-66
1.1.1.39-RXN	EC-1.1.1.38 EC-1.1.1.39	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 12896 Tiso gene 6675 Tiso gene 12200	PWY-3641 GLUCONEO-PWY PWY-7384 PWY-7686 PWY-7115 PWY-7118
1.1.1.8-RXN	EC-1.1.1.8	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13013 Tiso gene 15777 Tiso gene 6069 Tiso gene 2810 Tiso gene 2811 Tiso gene 3718	PWY-6118 PWY-7385 PWY-7411
1.10.2.2-RXN	EC-1.10.2.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 7235 Tiso gene 9627 Tiso gene 4973 Tiso gene 18330 Tiso gene 15926	PWY-7279 PWY-7082 PWY-3781
1.11.1.12-RXN	EC-1.11.1.12	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		PWY-4081
1.13.11.6-RXN	EC-1.13.11.6	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 10922	PWY-5651 PWY-5647 PWY-6309 PWY-6505
1.14.11.2-RXN	EC-1.14.11.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 9165 Tiso gene 16122 Tiso gene 17919 Tiso gene 18235 Tiso gene 15594 Tiso gene 9455 Tiso gene 18208 Tiso gene 1468 Tiso gene 13008 Tiso gene 8652 Tiso gene 4246 Tiso gene 3021 Tiso gene 9227 Tiso gene 17593 Tiso gene 292 Tiso gene 9873 Tiso gene 9035 Tiso gene 6296 Tiso gene 9636 Tiso gene 16842 Tiso gene 19638 Tiso gene 18933 Tiso gene 2158 Tiso gene 18145 Tiso gene 15328 Tiso gene 18689 Tiso gene 2280 Tiso gene 17823
1.18.1.2-RXN	EC-1.18.1.2	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 20054 Tiso gene 19031 Tiso gene 17381 Tiso gene 17170 Tiso gene 20055 Tiso gene 20168	PWY-7230 PWY-101
1.2.1.13-RXN	EC-1.2.1.13	Manual Annotation	Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation	Tiso gene 6765 Tiso gene 20000 Tiso gene 10646 Tiso gene 6766	CALVIN-PWY
1.2.1.25-RXN	EC-1.2.1.25	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 11793 Tiso gene 3260	VALDEG-PWY
1.2.4.4-RXN	EC-1.2.4.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 18084 Tiso gene 11793 Tiso gene 3260	PWY-5046
1.5.1.20-RXN	EC-1.5.1.20	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 16954 Tiso gene 14582	PWY-2201 1CMET2-PWY CODH-PWY PWY-3841
13-BETA-GLUCAN-SYNTHASE-RXN	EC-2.4.1.34	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7603 Tiso gene 5462 Tiso gene 7967 Tiso gene 7966 Tiso gene 3322 Tiso gene 5460	PWY-6773
1TRANSKETO-RXN	EC-2.2.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Manual-primary network Orthology-athaliana Annotation-experimental annotation Orthology-synechocystis	Tiso gene 5008 Tiso gene 11559	P124-PWY CALVIN-PWY P21-PWY PWY-5723 PWY-1861 P185-PWY NONOXIPENT-PWY
2-ISOPROPYLMALATESYN-RXN	EC-2.3.3.13	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 11453	LEUSYN-PWY PWY-6871
2.3.1.118-RXN	EC-2.3.1.118	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 9942
2.3.1.155-RXN	EC-2.3.1.155	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		PWY-7654 PWY-7656
2.3.1.168-RXN	EC-2.3.1.168	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 11793 Tiso gene 3260	PWY-5046
2.3.1.179-RXN	EC-2.3.1.179	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 19302 Tiso gene 19303 Tiso gene 14485	PWY-5973
2.3.1.180-RXN	EC-2.3.1.180	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 15991	PWY-4381
2.3.1.41-RXN	EC-2.3.1.41	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 9885 Tiso gene 15991 Tiso gene 19302 Tiso gene 5939 Tiso gene 13083 Tiso gene 14485
2.4.1.119-RXN	EC-2.4.99.18	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 10448 Tiso gene 26	MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2.6.1.22-RXN	EC-2.6.1.22	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation		VALDEG-PWY
2.7.1.148-RXN	EC-2.7.1.148	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13463	NONMEVIPP-PWY PWY-7560
2.7.1.149-RXN	EC-2.7.1.149	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		PWY-6367 PWY-6351
2.7.1.160-RXN	EC-2.7.1.160	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 17372	PWY-6689
2.7.1.68-RXN	EC-2.7.1.68	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 9590 Tiso gene 14055 Tiso gene 14966 Tiso gene 2021 Tiso gene 7487 Tiso gene 15721 Tiso gene 1131 Tiso gene 2008 Tiso gene 18887 Tiso gene 17887 Tiso gene 9249 Tiso gene 730 Tiso gene 2350 Tiso gene 15722 Tiso gene 17532 Tiso gene 11381	PWY-6352 PWY-6351
2.7.1.90-RXN	EC-2.7.1.90	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 596	PWY-1042
2.7.11.18-RXN	EC-2.7.11.18	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 4338 Tiso gene 4337 Tiso gene 6216
2.7.11.2-RXN	EC-2.7.11.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 20269 Tiso gene 12579 Tiso gene 20270
2.7.11.20-RXN	EC-2.7.11.20	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 15126
2.7.11.24-RXN	EC-2.7.11.24	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7161 Tiso gene 15329 Tiso gene 169 Tiso gene 1338 Tiso gene 10060 Tiso gene 2152 Tiso gene 15060 Tiso gene 8480 Tiso gene 9582 Tiso gene 10793 Tiso gene 10792 Tiso gene 19611
2.7.7.60-RXN	EC-2.7.7.60	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17568	NONMEVIPP-PWY PWY-7560
2.7.7.8-RXN	EC-2.7.7.8	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2987
2.7.8.11-RXN	EC-2.7.8.11	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 6541	PHOSLIPSYN2-PWY PWY-7625 PWY-6351 PWY-6352
2.8.1.6-RXN	EC-2.8.1.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 10345	PWY0-1507 PWY-7380
2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN	EC-1.2.1	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		LEU-DEG2-PWY
2OXOGLUTDECARB-RXN	EC-1.2.4.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 10209	PWY66-398 PWY-5084
2PGADEHYDRAT-RXN	EC-4.2.1.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 5619 Tiso gene 13317 Tiso gene 14718 Tiso gene 8720	PWY-1042 P341-PWY PWY-2221 PWY-7124 PWY-1622 GLUCONEO-PWY GLYCOLYSIS NPGLUCAT-PWY ANAGLYCOLYSIS-PWY PWY-7218 PWY-6901 P124-PWY PWY-6886 PWY-5723 PWY-6142 P122-PWY PWY66-399 PWY-5484 PWY-7003
2TRANSKETO-RXN	EC-2.2.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network	Tiso gene 11559 Tiso gene 5008	PWY-6901 CALVIN-PWY P21-PWY PWY-5723 PWY-1861 P185-PWY NONOXIPENT-PWY
3-HYDROXYDECANOYL-ACP-DEHYDR-RXN	EC-2.3.1.86 EC-2.3.1.85 EC-4.2.1.59	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 136 Tiso gene 500 Tiso gene 6884 Tiso gene 135 Tiso gene 10876 Tiso gene 13394	FASYN-ELONG-PWY
3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN	EC-1.1.1.31	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus Annotation-experimental annotation	Tiso gene 19590 Tiso gene 5857 Tiso gene 19771 Tiso gene 7107 Tiso gene 19772 Tiso gene 19592	VALDEG-PWY
3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN	EC-3.1.2.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-creinhardtii Annotation-experimental annotation	Tiso gene 2224	VALDEG-PWY
3-ISOPROPYLMALDEHYDROG-RXN		Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-experimental annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 2920	LEUSYN-PWY PWY-6871
3-ISOPROPYLMALISOM-RXN		Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 12778	LEUSYN-PWY PWY-6871
3-OXOACID-COA-TRANSFERASE-RXN	EC-2.8.3.5	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 6754
3-OXOACYL-ACP-REDUCT-RXN	EC-2.3.1.86 EC-2.3.1.85 EC-1.1.1.100	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 10876 Tiso gene 13394 Tiso gene 9885 Tiso gene 135 Tiso gene 13083 Tiso gene 136 Tiso gene 500	FASYN-ELONG-PWY
... further results

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+{{#ask: [[Category:Reaction]] [[reconstruction source::annotation-experimental_annotation]]
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Difference between revisions of "Annotation-experimental annotation"

Latest revision as of 20:26, 21 March 2018

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