Difference between revisions of "Tiso gene 13847"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy....")
 
(Created page with "Category:Gene == Gene Tiso_gene_13847 == * right end position: ** 13053 * transcription direction: ** POSITIVE * left end position: ** 11841 * centisome position: ** 88.29...")
 
(3 intermediate revisions by the same user not shown)
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HOMOCYSMET-RXN HOMOCYSMET-RXN] ==
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== Gene Tiso_gene_13847 ==
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* direction:
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* right end position:
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** REVERSIBLE
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** 13053
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.1.1.14 EC-2.1.1.14]
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** POSITIVE
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* left end position:
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** 11841
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* centisome position:
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** 88.299774   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN]]
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** 1 [[HOMO-CYS]][c] '''+''' 1 [[CPD-1302]][c] '''<=>''' 1 [[CPD-1301]][c] '''+''' 1 [[MET]][c]
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** Source: [[orthology-esiliculosus]]
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* With common name(s):
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* Reaction: [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
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** 1 L-homocysteine[c] '''+''' 1 N5-methyl--tetrahydropteroyl tri-L-glutamate[c] '''<=>''' 1 tetrahydropteroyl tri-L-glutamate[c] '''+''' 1 L-methionine[c]
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** Source: [[orthology-esiliculosus]]
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* Reaction: [[RXN-15684]]
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== Genes associated with this reaction  ==
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** Source: [[annotation-in-silico_annotation]]
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Genes have been associated with this reaction based on different elements listed below.
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*** Assignment: ec-number
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* [[Tiso_gene_1602]]
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** Source: [[orthology-esiliculosus]]
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** EXPERIMENTAL_ANNOTATION
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* Reaction: [[THIOL-OXIDASE-RXN]]
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***AUTOMATED-NAME-MATCH
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** Source: [[annotation-in-silico_annotation]]
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== Pathways  ==
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*** Assignment: ec-number
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* [[HOMOSER-METSYN-PWY]], L-methionine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=HOMOSER-METSYN-PWY HOMOSER-METSYN-PWY]
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** Source: [[orthology-esiliculosus]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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== Pathways associated ==
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* [[PWY-702]], L-methionine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-702 PWY-702]
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* [[PWY-7539]]
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** '''5''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7533]]
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* [[HSERMETANA-PWY]], L-methionine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=HSERMETANA-PWY HSERMETANA-PWY]
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* [[PWY-6797]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6147]]
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* [[PWY-6151]], S-adenosyl-L-methionine cycle I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6151 PWY-6151]
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** '''4''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5041]], S-adenosyl-L-methionine cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5041 PWY-5041]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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== Reconstruction information  ==
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[experimental_annotation]]
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*** [[in-silico_annotation]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=13053}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21196 21196]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: left end position=11841}}
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** [http://www.genome.jp/dbget-bin/www_bget?R04405 R04405]
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{{#set: centisome position=88.299774    }}
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* UNIPROT:
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{{#set: reaction associated=DIHYDRONEOPTERIN-MONO-P-DEPHOS-RXN|H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN|RXN-15684|THIOL-OXIDASE-RXN}}
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** [http://www.uniprot.org/uniprot/P25665 P25665]
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{{#set: pathway associated=PWY-7539|PWY-7533|PWY-6797|PWY-6147}}
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** [http://www.uniprot.org/uniprot/P45331 P45331]
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** [http://www.uniprot.org/uniprot/Q9PN94 Q9PN94]
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** [http://www.uniprot.org/uniprot/O26869 O26869]
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** [http://www.uniprot.org/uniprot/Q9JUT6 Q9JUT6]
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** [http://www.uniprot.org/uniprot/Q9CG55 Q9CG55]
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** [http://www.uniprot.org/uniprot/P05694 P05694]
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** [http://www.uniprot.org/uniprot/Q42699 Q42699]
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** [http://www.uniprot.org/uniprot/Q39586 Q39586]
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** [http://www.uniprot.org/uniprot/O48613 O48613]
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** [http://www.uniprot.org/uniprot/P93263 P93263]
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** [http://www.uniprot.org/uniprot/Q9UT19 Q9UT19]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.1.1.14}}
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{{#set: gene associated=Tiso_gene_1602}}
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{{#set: in pathway=HOMOSER-METSYN-PWY|PWY-702|HSERMETANA-PWY|PWY-6151|PWY-5041}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
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Latest revision as of 19:55, 21 March 2018

Gene Tiso_gene_13847

  • right end position:
    • 13053
  • transcription direction:
    • POSITIVE
  • left end position:
    • 11841
  • centisome position:
    • 88.299774
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_13847&oldid=44684"