Difference between revisions of "CPD0-2152"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] == * direction: ** LEFT-TO-RIGHT * common name: ** polyketide_synthase ** ORF *...")
(Created page with "Category:Gene == Gene Tiso_gene_6558 == * right end position: ** 8546 * transcription direction: ** POSITIVE * left end position: ** 7286 * centisome position: ** 60.41459...")
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[[Category:Reaction]]
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[[Category:Gene]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7706 RXN-7706] ==
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== Gene Tiso_gene_6558 ==
* direction:
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* right end position:
** LEFT-TO-RIGHT
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** 8546
* common name:
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* transcription direction:
** polyketide_synthase
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** POSITIVE
** ORF
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* left end position:
* ec number:
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** 7286
** [http://enzyme.expasy.org/EC/1.1.1.1 EC-1.1.1.1]
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* centisome position:
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** 60.414593   
 
* Synonym(s):
 
* Synonym(s):
  
== Reaction Formula ==
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== Reactions associated ==
* With identifiers:
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* Reaction: [[3.2.2.23-RXN]]
** 1 [[CPD-7036]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''=>''' 1 [[NAD]][c] '''+''' 1 [[CPD-7037]][c]
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** Source: [[annotation-in-silico_annotation]]
* With common name(s):
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*** Assignment: automated-name-match
** 1 3-methylthiopropanal[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] '''=>''' 1 NAD+[c] '''+''' 1 methionol[c]
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* Reaction: [[4.2.99.18-RXN]]
 
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** Source: [[annotation-in-silico_annotation]]
== Genes associated with this reaction  ==
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*** Assignment: ec-number
Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN0-2601]]
* [[Tiso_gene_7649]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5425]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6563]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_6562]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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* [[Tiso_gene_5424]]
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** IN-SILICO_ANNOTATION
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***EC-NUMBER
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== Pathways  ==
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* [[PWY-5082]], L-methionine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5082 PWY-5082]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[annotation]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
*** Tool: [[pathwaytools]]
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*** Assignment: ec-number
 +
== Pathways associated ==
 
== External links  ==
 
== External links  ==
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=8546}}
{{#set: common name=polyketide_synthase}}
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{{#set: transcription direction=POSITIVE}}
{{#set: common name=ORF}}
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{{#set: left end position=7286}}
{{#set: ec number=EC-1.1.1.1}}
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{{#set: centisome position=60.414593    }}
{{#set: gene associated=Tiso_gene_7649|Tiso_gene_5425|Tiso_gene_6563|Tiso_gene_6562|Tiso_gene_5424}}
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{{#set: reaction associated=3.2.2.23-RXN|4.2.99.18-RXN|RXN0-2601}}
{{#set: in pathway=PWY-5082}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 15:40, 21 March 2018

Gene Tiso_gene_6558

  • right end position:
    • 8546
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7286
  • centisome position:
    • 60.414593
  • Synonym(s):

Reactions associated

Pathways associated

External links