Difference between revisions of "Category:Reaction"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMACYLTRANS-RXN UDPNACETYLGLUCOSAMACYLTRANS-RXN] == * direction: ** LEFT-TO-RIGHT *...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] == * direction: ** REVERSIBLE * common name: **...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPNACETYLGLUCOSAMACYLTRANS-RXN UDPNACETYLGLUCOSAMACYLTRANS-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=UTPHEXPURIDYLYLTRANS-RXN UTPHEXPURIDYLYLTRANS-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* common name:
 
* common name:
−
** acyl---udp-n-acetylglucosamine_acyltransferase
+
** dp-n-acetylglucosamine_pyrophosphorylase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.3.1.129 EC-2.3.1.129]
+
** [http://enzyme.expasy.org/EC/2.7.7.64 EC-2.7.7.64]
 +
** [http://enzyme.expasy.org/EC/2.7.7.10 EC-2.7.7.10]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[R-3-hydroxymyristoyl-ACPs]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[UDP-OHMYR-ACETYLGLUCOSAMINE]][c] '''+''' 1 [[ACP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[GALACTOSE-1P]][c] '''+''' 1 [[UTP]][c] '''<=>''' 1 [[CPD-14553]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a (3R)-3-hydroxymyristoyl-[acp][c] '''+''' 1 UDP-N-acetyl-&alpha;-D-glucosamine[c] '''=>''' 1 UDP-3-O-[(3R)-3-hydroxymyristoyl]-N-acetyl-&alpha;-D-glucosamine[c] '''+''' 1 a holo-[acyl-carrier protein][c]
+
** 1 H+[c] '''+''' 1 &alpha;-D-galactose 1-phosphate[c] '''+''' 1 UTP[c] '''<=>''' 1 UDP-&alpha;-D-galactose[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[Tiso_gene_19198]]
+
* Gene: [[Tiso_gene_9110]]
−
** IN-SILICO_ANNOTATION
+
** Source: [[annotation-experimental_annotation]]
−
***EC-NUMBER
+
*** Assignment: AUTOMATED-NAME-MATCH
−
** [[pantograph]]-[[synechocystis]]
+
* Gene: [[Tiso_gene_6457]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_6459]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[Tiso_gene_14796]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_17566]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[Tiso_gene_6458]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
−
* [[NAGLIPASYN-PWY]], lipid IVA biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=NAGLIPASYN-PWY NAGLIPASYN-PWY]
+
* [[PWY-6527]], stachyose degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6527 PWY-6527]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3821]], D-galactose degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3821 PWY-3821]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* Category: [[orthology]]
 
−
** Source: [[orthology-synechocystis]]
 
−
*** Tool: [[pantograph]]
 
 
* Category: [[annotation]]
 
* Category: [[annotation]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Tool: [[pathwaytools]]
 
** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14209 14209]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R04567 R04567]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00502 R00502]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/Q9PIM1 Q9PIM1]
+
** [http://www.uniprot.org/uniprot/P22714 P22714]
−
** [http://www.uniprot.org/uniprot/Q9JX26 Q9JX26]
+
** [http://www.uniprot.org/uniprot/P96994 P96994]
−
** [http://www.uniprot.org/uniprot/P43887 P43887]
+
** [http://www.uniprot.org/uniprot/P39575 P39575]
−
** [http://www.uniprot.org/uniprot/P32200 P32200]
+
** [http://www.uniprot.org/uniprot/P40908 P40908]
−
** [http://www.uniprot.org/uniprot/P32201 P32201]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P0A722 P0A722]
+
{{#set: common name=dp-n-acetylglucosamine_pyrophosphorylase}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: ec number=EC-2.7.7.64}}
−
{{#set: common name=acyl---udp-n-acetylglucosamine_acyltransferase}}
+
{{#set: ec number=EC-2.7.7.10}}
−
{{#set: ec number=EC-2.3.1.129}}
+
{{#set: gene associated=Tiso_gene_9110|Tiso_gene_6457|Tiso_gene_6459|Tiso_gene_14796|Tiso_gene_17566|Tiso_gene_6458}}
−
{{#set: gene associated=Tiso_gene_19198}}
+
{{#set: in pathway=PWY-6527|PWY-3821}}
−
{{#set: in pathway=NAGLIPASYN-PWY}}
+
{{#set: reconstruction category=annotation}}
−
{{#set: reconstruction category=orthology|annotation}}
+
{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
−
{{#set: reconstruction source=annotation-in-silico_annotation|orthology-synechocystis}}
+
{{#set: reconstruction tool=pathwaytools}}
−
{{#set: reconstruction tool=pantograph|pathwaytools}}
+

Revision as of 16:09, 21 March 2018

Reaction UTPHEXPURIDYLYLTRANS-RXN

  • direction:
    • REVERSIBLE
  • common name:
    • dp-n-acetylglucosamine_pyrophosphorylase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H+[c] + 1 α-D-galactose 1-phosphate[c] + 1 UTP[c] <=> 1 UDP-α-D-galactose[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6527, stachyose degradation: PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-3821, D-galactose degradation III: PWY-3821
    • 3 reactions found over 3 reactions in the full pathway

Reconstruction information

External links





Pages in category "Reaction"

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