Difference between revisions of "ADP"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADP ADP] == * smiles: ** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP(=O)([O-])[O-])([O-...")
 
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=LYSDECARBOX-RXN LYSDECARBOX-RXN] ==
+
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ADP ADP] ==
−
* direction:
+
* smiles:
−
** LEFT-TO-RIGHT
+
** C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP(=O)([O-])[O-])([O-])=O
−
* ec number:
+
* common name:
−
** [http://enzyme.expasy.org/EC/4.1.1.18 EC-4.1.1.18]
+
** ADP
 +
* inchi key:
 +
** InChIKey=XTWYTFMLZFPYCI-KQYNXXCUSA-K
 +
* molecular weight:
 +
** 424.18  
 
* Synonym(s):
 
* Synonym(s):
 +
** adenosine pyrophosphate
 +
** adenosine 5'-pyrophosphate
 +
** adenosine-5'-diphosphate
 +
** adenosine-diphosphate
 +
** adenosine-5-diphosphate
  
−
== Reaction Formula ==
+
== Reaction(s) known to consume the compound ==
−
* With identifiers:
+
* [[RXN-10862]]
−
** 1 [[LYS]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CADAVERINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
* [[ADPREDUCT-RXN]]
−
* With common name(s):
+
* [[ADPA]]
−
** 1 L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 cadaverine[c] '''+''' 1 CO2[c]
+
* [[RXN-4305]]
−
 
+
* [[ATP_3h_th]]
−
== Genes associated with this reaction  ==
+
* [[ATP_3h_tm]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[RXN0-747]]
−
* Gene: [[Tiso_gene_10395]]
+
== Reaction(s) known to produce the compound ==
−
** Source: [[orthology-synechocystis]]
+
* [[ATPPH]]
−
== Pathways  ==
+
* [[DETHIOBIOTIN-SYN-RXN]]
−
* [[PWY0-461]], L-lysine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-461 PWY0-461]
+
* [[AGK]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
* [[SPHINGANINE-KINASE-RXN]]
−
* [[PWY-5468]], lupanine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5468 PWY-5468]
+
* [[RXN-7913]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[BIS5-ADENOSYL-TRIPHOSPHATASE-RXN]]
−
* [[PWY-6381]], bisucaberin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6381 PWY-6381]
+
* [[DEPHOSPHOCOAKIN-RXN]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[DGDPKIN-RXN]]
−
* [[PWY0-1303]], aminopropylcadaverine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1303 PWY0-1303]
+
* [[6.3.5.7-RXN]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
* [[3.6.3.1-RXN]]
−
* [[PWY-6328]], L-lysine degradation X: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6328 PWY-6328]
+
* [[RXN-12093]]
−
** '''1''' reactions found over '''6''' reactions in the full pathway
+
* [[RXN-11109]]
−
* [[PWY-6375]], desferrioxamine E biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6375 PWY-6375]
+
* [[AUPT]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[RXN-8626]]
−
* [[PWY-6376]], desferrioxamine B biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6376 PWY-6376]
+
* [[2.7.1.127-RXN]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
* [[PNKIN-RXN]]
−
== Reconstruction information  ==
+
* [[XYLULOKIN-RXN]]
−
* Category: [[orthology]]
+
* [[ARPT]]
−
** Source: [[orthology-synechocystis]]
+
* [[GUANYL-KIN-RXN]]
−
*** Tool: [[pantograph]]
+
* [[ATCMf]]
 +
* [[GLUTKIN-RXN]]
 +
* [[ATDGM]]
 +
* [[ATAM]]
 +
* [[DIHYDROFOLATESYNTH-RXN]]
 +
* [[RXN-7163]]
 +
* [[RXN66-521]]
 +
* [[ATDGD]]
 +
* [[HOMOSERKIN-RXN]]
 +
* [[ATPASE-RXN]]
 +
* [[RXN-1685]]
 +
* [[TETRAACYLDISACC4KIN-RXN]]
 +
* [[DGSNPT]]
 +
* [[FRUCTOKINASE-RXN]]
 +
* [[ADENYL-KIN-RXN]]
 +
* [[GLUTAMINESYN-RXN]]
 +
* [[ATID]]
 +
* [[ATDTDm]]
 +
* [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
 +
* [[RXN1G-4355]]
 +
* [[ATP_3h_th]]
 +
* [[ATP_3h_tm]]
 +
* [[PEPCARBOXYKIN-RXN]]
 +
* [[FOLYLPOLYGLUTAMATESYNTH-RXN]]
 +
* [[PYRUVATE-CARBOXYLASE-RXN]]
 +
* [[RXN-12002]]
 +
* [[ATCDm]]
 +
* [[GLUTATHIONE-SYN-RXN]]
 +
* [[ATDUD]]
 +
* [[ACETYL-COA-CARBOXYLTRANSFER-RXN]]
 +
* [[6.3.4.16-RXN]]
 +
* [[RXN-15005]]
 +
* [[6.3.5.6-RXN]]
 +
* [[FORMATETHFLIG-RXN]]
 +
* [[RXN1F-20]]
 +
* [[ADENOSINETRIPHOSPHATASE-RXN]]
 +
* [[PYRAMKIN-RXN]]
 +
* [[ATDCDm]]
 +
* [[PCr]]
 +
* [[GLYRIBONUCSYN-RXN]]
 +
* [[CTPSYN-RXN]]
 +
* [[3.6.1.41-RXN]]
 +
* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
 +
* [[CHOLINE-KINASE-RXN]]
 +
* [[DADPKIN-RXN]]
 +
* [[NDPK]]
 +
* [[RXN-14391]]
 +
* [[RME256]]
 +
* [[RME255]]
 +
* [[ATCY]]
 +
* [[ATCD]]
 +
* [[CYTIKIN-RXN]]
 +
* [[PYRIDOXKIN-RXN]]
 +
* [[ATCM]]
 +
* [[RXN3DJ-11417]]
 +
* [[RXN0-742]]
 +
* [[URIDINEKIN-RXN]]
 +
* [[CARBPSYN-RXN]]
 +
* [[3.6.4.9-RXN]]
 +
* [[KETOHEXOKINASE-RXN]]
 +
* [[RXN0-4261]]
 +
* [[DCDPKIN-RXN]]
 +
* [[SAICARSYN-RXN]]
 +
* [[GLUTCYSLIG-RXN]]
 +
* [[2.7.13.3-RXN]]
 +
* [[3.6.4.1-RXN]]
 +
* [[RXN-14325]]
 +
* [[5-OXOPROLINASE-ATP-HYDROLYSING-RXN]]
 +
* [[RXN-14074]]
 +
* [[2.7.1.68-RXN]]
 +
* [[AGPT]]
 +
* [[PROTEIN-KINASE-RXN]]
 +
* [[DTDPKIN-RXN]]
 +
* [[GLUCURONOKINASE-RXN]]
 +
* [[FORMYLTHFGLUSYNTH-RXN]]
 +
* [[FA160COAabcp]]
 +
* [[UDPGtni]]
 +
* [[PYRIMSYN3-RXN]]
 +
* [[NUCLEOSIDE-PHOSPHATE-KINASE-RXN]]
 +
* [[THMPPPT]]
 +
* [[3.6.3.50-RXN]]
 +
* [[CDPKIN-RXN]]
 +
* [[6.3.2.25-RXN]]
 +
* [[THIAZOLSYN3-RXN]]
 +
* [[RME144]]
 +
* [[ATUDm]]
 +
* [[3.6.4.6-RXN]]
 +
* [[METHYLCROTONYL-COA-CARBOXYLASE-RXN]]
 +
* [[MANNKIN-RXN]]
 +
* [[RXN0-5055]]
 +
* [[GLY3KIN-RXN]]
 +
* [[UDPKIN-RXN]]
 +
* [[ATDCD]]
 +
* [[ATDTD]]
 +
* [[ATDCMf]]
 +
* [[ATIDm]]
 +
* [[DCYTPT]]
 +
* [[PANTOTHENATE-KIN-RXN]]
 +
* [[DUDPKIN-RXN]]
 +
* [[2.7.1.140-RXN]]
 +
* [[AIRS-RXN]]
 +
* [[RXN0-5116]]
 +
* [[DIACYLGLYKIN-RXN]]
 +
* [[ATAMf]]
 +
* [[2.7.1.139-RXN]]
 +
* [[AGPTf]]
 +
* [[ADENOSINE-KINASE-RXN]]
 +
* [[DTMPKI-RXN]]
 +
* [[ATAMm]]
 +
* [[M5TRK]]
 +
* [[ATUD]]
 +
* [[2.7.1.134-RXN]]
 +
* [[RIBOKIN-RXN]]
 +
* [[2.7.1.133-RXN]]
 +
* [[ATDUDm]]
 +
* [[BIOTIN-CARBOXYL-RXN]]
 +
* [[RXN0-6541]]
 +
* [[RXN0-1401]]
 +
* [[RXN-14196]]
 +
* [[FTHFL]]
 +
* [[2.7.1.149-RXN]]
 +
* [[RIBOFLAVINKIN-RXN]]
 +
* [[NAD-KIN-RXN]]
 +
* [[GLYCERONE-KINASE-RXN]]
 +
* [[GDPKIN-RXN]]
 +
* [[ADCPT]]
 +
* [[AASP]]
 +
* [[RXN-13202]]
 +
* [[THIAMIN-DIPHOSPHATE-KINASE-RXN]]
 +
* [[ATDCM]]
 +
* [[2.7.10.1-RXN]]
 +
* [[RXN-11832]]
 +
* [[2.7.1.148-RXN]]
 +
* [[ETHANOLAMINE-KINASE-RXN]]
 +
* [[ATGD]]
 +
* [[RXN-16909]]
 +
* [[6-PHOSPHOFRUCTO-2-KINASE-RXN]]
 +
* [[ATDAM]]
 +
* [[DAD2PT]]
 +
* [[GLCURK]]
 +
* [[NUCLEOSIDE-DIP-KIN-RXN]]
 +
* [[GMKALT-RXN]]
 +
* [[3.6.4.4-RXN]]
 +
* [[PE1819Z1819Zt]]
 +
* [[NDPKm]]
 +
* [[DEOXYADENYLATE-KINASE-RXN]]
 +
* [[RXN-8443]]
 +
* [[RME294]]
 +
* [[6PFRUCTPHOS-RXN]]
 +
* [[UMPKf]]
 +
* [[CARNOSINE-SYNTHASE-RXN]]
 +
* [[GLUCOKIN-RXN]]
 +
* [[RXN0-2921]]
 +
* [[FGAMSYN-RXN]]
 +
== Reaction(s) of unknown directionality ==
 +
* [[2.7.11.2-RXN]]
 +
* [[GALACTOKIN-RXN]]
 +
* [[HEXOKINASE-RXN]]
 +
* [[RXN-6341]]
 +
* [[5.99.1.3-RXN]]
 +
* [[RXN-14906]]
 +
* [[SHIKIMATE-KINASE-RXN]]
 +
* [[ASPARTATEKIN-RXN]]
 +
* [[PROPIONYL-COA-CARBOXY-RXN]]
 +
* [[3.6.3.8-RXN]]
 +
* [[PHOSPHORIBULOKINASE-RXN]]
 +
* [[ADENYLYLSULFKIN-RXN]]
 +
* [[GLYCEROL-KIN-RXN]]
 +
* [[ACETYLGLUTKIN-RXN]]
 +
* [[TRANS-RXN-249]]
 +
* [[PEPDEPHOS-RXN]]
 +
* [[TAU-PROTEIN-KINASE-RXN]]
 +
* [[RXN-14120]]
 +
* [[CARBAMATE-KINASE-RXN]]
 +
* [[2.7.12.2-RXN]]
 +
* [[2.4.1.213-RXN]]
 +
* [[RXN-16317]]
 +
* [[RXN-11135]]
 +
* [[RXN-10038]]
 +
* [[MEVALONATE-KINASE-RXN]]
 +
* [[2.7.11.20-RXN]]
 +
* [[2.7.12.1-RXN]]
 +
* [[2.7.11.24-RXN]]
 +
* [[D-RIBULOKIN-RXN]]
 +
* [[PANTETHEINE-KINASE-RXN]]
 +
* [[2.7.11.18-RXN]]
 +
* [[PROLINE-MULTI]]
 +
* [[ATPSYN-RXN]]
 +
* [[RXN-14223]]
 +
* [[SUCCCOASYN-RXN]]
 +
* [[RIBULOKIN-RXN]]
 +
* [[RXN-14228]]
 +
* [[PHOSGLYPHOS-RXN]]
 +
* [[2.7.11.22-RXN]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* CAS : 58-64-0
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22352 22352]
+
* BIGG : adp
−
* LIGAND-RXN:
+
* PUBCHEM:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00462 R00462]
+
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=7058055 7058055]
−
* UNIPROT:
+
* HMDB : HMDB01341
−
** [http://www.uniprot.org/uniprot/P05033 P05033]
+
* LIGAND-CPD:
−
** [http://www.uniprot.org/uniprot/P21885 P21885]
+
** [http://www.genome.jp/dbget-bin/www_bget?C00008 C00008]
−
** [http://www.uniprot.org/uniprot/P0A9H3 P0A9H3]
+
* CHEMSPIDER:
−
** [http://www.uniprot.org/uniprot/P52095 P52095]
+
** [http://www.chemspider.com/Chemical-Structure.5414423.html 5414423]
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* CHEBI:
−
{{#set: ec number=EC-4.1.1.18}}
+
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=456216 456216]
−
{{#set: gene associated=Tiso_gene_10395}}
+
* METABOLIGHTS : MTBLC456216
−
{{#set: in pathway=PWY0-461|PWY-5468|PWY-6381|PWY0-1303|PWY-6328|PWY-6375|PWY-6376}}
+
{{#set: smiles=C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP(=O)([O-])[O-])([O-])=O}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: common name=ADP}}
−
{{#set: reconstruction source=orthology-synechocystis}}
+
{{#set: inchi key=InChIKey=XTWYTFMLZFPYCI-KQYNXXCUSA-K}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: molecular weight=424.18    }}
 +
{{#set: common name=adenosine pyrophosphate|adenosine 5'-pyrophosphate|adenosine-5'-diphosphate|adenosine-diphosphate|adenosine-5-diphosphate}}
 +
{{#set: consumed by=RXN-10862|ADPREDUCT-RXN|ADPA|RXN-4305|ATP_3h_th|ATP_3h_tm|RXN0-747}}
 +
{{#set: produced by=ATPPH|DETHIOBIOTIN-SYN-RXN|AGK|SPHINGANINE-KINASE-RXN|RXN-7913|BIS5-ADENOSYL-TRIPHOSPHATASE-RXN|DEPHOSPHOCOAKIN-RXN|DGDPKIN-RXN|6.3.5.7-RXN|3.6.3.1-RXN|RXN-12093|RXN-11109|AUPT|RXN-8626|2.7.1.127-RXN|PNKIN-RXN|XYLULOKIN-RXN|ARPT|GUANYL-KIN-RXN|ATCMf|GLUTKIN-RXN|ATDGM|ATAM|DIHYDROFOLATESYNTH-RXN|RXN-7163|RXN66-521|ATDGD|HOMOSERKIN-RXN|ATPASE-RXN|RXN-1685|TETRAACYLDISACC4KIN-RXN|DGSNPT|FRUCTOKINASE-RXN|ADENYL-KIN-RXN|GLUTAMINESYN-RXN|ATID|ATDTDm|1-PHOSPHATIDYLINOSITOL-KINASE-RXN|RXN1G-4355|ATP_3h_th|ATP_3h_tm|PEPCARBOXYKIN-RXN|FOLYLPOLYGLUTAMATESYNTH-RXN|PYRUVATE-CARBOXYLASE-RXN|RXN-12002|ATCDm|GLUTATHIONE-SYN-RXN|ATDUD|ACETYL-COA-CARBOXYLTRANSFER-RXN|6.3.4.16-RXN|RXN-15005|6.3.5.6-RXN|FORMATETHFLIG-RXN|RXN1F-20|ADENOSINETRIPHOSPHATASE-RXN|PYRAMKIN-RXN|ATDCDm|PCr|GLYRIBONUCSYN-RXN|CTPSYN-RXN|3.6.1.41-RXN|DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN|CHOLINE-KINASE-RXN|DADPKIN-RXN|NDPK|RXN-14391|RME256|RME255|ATCY|ATCD|CYTIKIN-RXN|PYRIDOXKIN-RXN|ATCM|RXN3DJ-11417|RXN0-742|URIDINEKIN-RXN|CARBPSYN-RXN|3.6.4.9-RXN|KETOHEXOKINASE-RXN|RXN0-4261|DCDPKIN-RXN|SAICARSYN-RXN|GLUTCYSLIG-RXN|2.7.13.3-RXN|3.6.4.1-RXN|RXN-14325|5-OXOPROLINASE-ATP-HYDROLYSING-RXN|RXN-14074|2.7.1.68-RXN|AGPT|PROTEIN-KINASE-RXN|DTDPKIN-RXN|GLUCURONOKINASE-RXN|FORMYLTHFGLUSYNTH-RXN|FA160COAabcp|UDPGtni|PYRIMSYN3-RXN|NUCLEOSIDE-PHOSPHATE-KINASE-RXN|THMPPPT|3.6.3.50-RXN|CDPKIN-RXN|6.3.2.25-RXN|THIAZOLSYN3-RXN|RME144|ATUDm|3.6.4.6-RXN|METHYLCROTONYL-COA-CARBOXYLASE-RXN|MANNKIN-RXN|RXN0-5055|GLY3KIN-RXN|UDPKIN-RXN|ATDCD|ATDTD|ATDCMf|ATIDm|DCYTPT|PANTOTHENATE-KIN-RXN|DUDPKIN-RXN|2.7.1.140-RXN|AIRS-RXN|RXN0-5116|DIACYLGLYKIN-RXN|ATAMf|2.7.1.139-RXN|AGPTf|ADENOSINE-KINASE-RXN|DTMPKI-RXN|ATAMm|M5TRK|ATUD|2.7.1.134-RXN|RIBOKIN-RXN|2.7.1.133-RXN|ATDUDm|BIOTIN-CARBOXYL-RXN|RXN0-6541|RXN0-1401|RXN-14196|FTHFL|2.7.1.149-RXN|RIBOFLAVINKIN-RXN|NAD-KIN-RXN|GLYCERONE-KINASE-RXN|GDPKIN-RXN|ADCPT|AASP|RXN-13202|THIAMIN-DIPHOSPHATE-KINASE-RXN|ATDCM|2.7.10.1-RXN|RXN-11832|2.7.1.148-RXN|ETHANOLAMINE-KINASE-RXN|ATGD|RXN-16909|6-PHOSPHOFRUCTO-2-KINASE-RXN|ATDAM|DAD2PT|GLCURK|NUCLEOSIDE-DIP-KIN-RXN|GMKALT-RXN|3.6.4.4-RXN|PE1819Z1819Zt|NDPKm|DEOXYADENYLATE-KINASE-RXN|RXN-8443|RME294|6PFRUCTPHOS-RXN|UMPKf|CARNOSINE-SYNTHASE-RXN|GLUCOKIN-RXN|RXN0-2921|FGAMSYN-RXN}}
 +
{{#set: reversible reaction associated=2.7.11.2-RXN|GALACTOKIN-RXN|HEXOKINASE-RXN|RXN-6341|5.99.1.3-RXN|RXN-14906|SHIKIMATE-KINASE-RXN|ASPARTATEKIN-RXN|PROPIONYL-COA-CARBOXY-RXN|3.6.3.8-RXN|PHOSPHORIBULOKINASE-RXN|ADENYLYLSULFKIN-RXN|GLYCEROL-KIN-RXN|ACETYLGLUTKIN-RXN|TRANS-RXN-249|PEPDEPHOS-RXN|TAU-PROTEIN-KINASE-RXN|RXN-14120|CARBAMATE-KINASE-RXN|2.7.12.2-RXN|2.4.1.213-RXN|RXN-16317|RXN-11135|RXN-10038|MEVALONATE-KINASE-RXN|2.7.11.20-RXN|2.7.12.1-RXN|2.7.11.24-RXN|D-RIBULOKIN-RXN|PANTETHEINE-KINASE-RXN|2.7.11.18-RXN|PROLINE-MULTI|ATPSYN-RXN|RXN-14223|SUCCCOASYN-RXN|RIBULOKIN-RXN|RXN-14228|PHOSGLYPHOS-RXN|2.7.11.22-RXN}}

Latest revision as of 20:18, 21 March 2018

Metabolite ADP

  • smiles:
    • C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP(=O)([O-])[O-])([O-])=O
  • common name:
    • ADP
  • inchi key:
    • InChIKey=XTWYTFMLZFPYCI-KQYNXXCUSA-K
  • molecular weight:
    • 424.18
  • Synonym(s):
    • adenosine pyrophosphate
    • adenosine 5'-pyrophosphate
    • adenosine-5'-diphosphate
    • adenosine-diphosphate
    • adenosine-5-diphosphate

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 58-64-0
  • BIGG : adp
  • PUBCHEM:
  • HMDB : HMDB01341
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC456216
"C(C3(C(C(C(N2(C1(=C(C(=NC=N1)N)N=C2)))O3)O)O))OP(OP(=O)([O-])[O-])([O-])=O" cannot be used as a page name in this wiki.




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