Difference between revisions of "RXN-7719"
From metabolic_network
(Created page with "Category:Gene == Gene Tiso_gene_13561 == * right end position: ** 5777 * transcription direction: ** POSITIVE * left end position: ** 4735 * centisome position: ** 76.0887...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] == * direction: ** REVERSIBLE * common name: ** 3-methyl-2-oxobutanoate_dehydrog...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7719 RXN-7719] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | * common name: | |
| − | ** | + | ** 3-methyl-2-oxobutanoate_dehydrogenase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4] |
| − | * | + | |
| − | ** | + | |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * | + | * With identifiers: |
| + | ** 1 [[BCAA-dehydrogenase-DH-lipoyl]][c] '''+''' 1 [[NAD]][c] '''<=>''' 1 [[BCAA-dehydrogenase-lipoyl]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] | ||
| + | * With common name(s): | ||
| + | ** 1 an [apo BCAA dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''+''' 1 NAD+[c] '''<=>''' 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''+''' 1 NADH[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Tiso_gene_3260]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[Tiso_gene_11793]] | ||
** Source: [[annotation-in-silico_annotation]] | ** Source: [[annotation-in-silico_annotation]] | ||
| − | *** Assignment: | + | *** Assignment: AUTOMATED-NAME-MATCH |
| + | * Gene: [[Tiso_gene_9330]] | ||
** Source: [[orthology-esiliculosus]] | ** Source: [[orthology-esiliculosus]] | ||
| − | == Pathways | + | == Pathways == |
| + | * [[PWY-5046]], 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5046 PWY-5046] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-esiliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-experimental_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
| + | ** Source: [[annotation-in-silico_annotation]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: | + | {{#set: common name=3-methyl-2-oxobutanoate_dehydrogenase}} |
| − | {{#set: | + | {{#set: ec number=EC-1.8.1.4}} |
| − | {{#set: | + | {{#set: gene associated=Tiso_gene_3260|Tiso_gene_11793|Tiso_gene_9330}} |
| − | {{#set: | + | {{#set: in pathway=PWY-5046}} |
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation|orthology-esiliculosus}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 20:20, 21 March 2018
Contents
Reaction RXN-7719
- direction:
- REVERSIBLE
- common name:
- 3-methyl-2-oxobutanoate_dehydrogenase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 BCAA-dehydrogenase-DH-lipoyl[c] + 1 NAD[c] <=> 1 BCAA-dehydrogenase-lipoyl[c] + 1 PROTON[c] + 1 NADH[c]
- With common name(s):
- 1 an [apo BCAA dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] + 1 NAD+[c] <=> 1 an [apo BCAA dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] + 1 H+[c] + 1 NADH[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Tiso_gene_3260
- Source: annotation-experimental_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-experimental_annotation
- Gene: Tiso_gene_11793
- Source: annotation-in-silico_annotation
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-in-silico_annotation
- Gene: Tiso_gene_9330
- Source: orthology-esiliculosus
Pathways
- PWY-5046, 2-oxoisovalerate decarboxylation to isobutanoyl-CoA: PWY-5046
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-esiliculosus
- Tool: pantograph
- Source: orthology-esiliculosus
- Category: annotation
- Source: annotation-experimental_annotation
- Tool: pathwaytools
- Source: annotation-in-silico_annotation
- Tool: pathwaytools
- Source: annotation-experimental_annotation
