Difference between revisions of "Tiso gene 8543"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-4...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROTEIN-TYROSINE-PHOSPHATASE-RXN PROTEIN-TYROSINE-PHOSPHATASE-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6309 PWY-6309] ==
−
* direction:
+
* taxonomic range:
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** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-40674 TAX-40674]
 
* common name:
 
* common name:
−
** ORF
+
** L-tryptophan degradation XI (mammalian, via kynurenine)
−
** map_kinase_phosphatase_1
+
−
** dual_specificity_protein_phosphatase_cdc14a
+
−
** tyrosine_phosphatase_family_protein
+
−
** dual_specificity_phosphatase
+
−
** receptor-type_tyrosine-protein_phosphatase_delta-_partial
+
−
** probable_tyrosine-protein_phosphatase_dg1060
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/3.1.3.48 EC-3.1.3.48]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''9''' reactions found over '''17''' reactions in the full pathway
−
** 1 [[WATER]][c] '''+''' 1 [[Protein-tyrosine-phosphates]][c] '''=>''' 1 [[Protein-Tyrosines]][c] '''+''' 1 [[Pi]][c]
+
* [[1.13.11.6-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 H2O[c] '''+''' 1 a [protein]-L-tyrosine phosphate[c] '''=>''' 1 a [protein]-L-tyrosine[c] '''+''' 1 phosphate[c]
+
*** [[Tiso_gene_10922]]
−
 
+
** 1 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[annotation-experimental_annotation]]
−
Genes have been associated with this reaction based on different elements listed below.
+
* [[2.6.1.7-RXN]]
−
* [[Tiso_gene_8252]]
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** 1 associated gene(s):
−
** IN-SILICO_ANNOTATION
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*** [[Tiso_gene_15680]]
−
***EC-NUMBER
+
** 1 reconstruction source(s) associated:
−
** [[pantograph]]-[[esiliculosus]]
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*** [[orthology-esiliculosus]]
−
* [[Tiso_gene_807]]
+
* [[3-HYDROXY-KYNURENINASE-RXN]]
−
** IN-SILICO_ANNOTATION
+
** 2 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_10685]]
−
* [[Tiso_gene_13635]]
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*** [[Tiso_gene_10684]]
−
** IN-SILICO_ANNOTATION
+
** 1 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_3751]]
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* [[ARYLFORMAMIDASE-RXN]]
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** [[pantograph]]-[[esiliculosus]]
+
** 1 associated gene(s):
−
* [[Tiso_gene_4164]]
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*** [[Tiso_gene_16921]]
−
** IN-SILICO_ANNOTATION
+
** 1 reconstruction source(s) associated:
−
***AUTOMATED-NAME-MATCH
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*** [[orthology-creinhardtii]]
−
* [[Tiso_gene_19716]]
+
* [[KYNURENINASE-RXN]]
−
** IN-SILICO_ANNOTATION
+
** 2 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_10685]]
−
* [[Tiso_gene_3461]]
+
*** [[Tiso_gene_10684]]
−
** IN-SILICO_ANNOTATION
+
** 1 reconstruction source(s) associated:
−
***EC-NUMBER
+
*** [[annotation-in-silico_annotation]]
−
* [[Tiso_gene_16782]]
+
* [[KYNURENINE-3-MONOOXYGENASE-RXN]]
−
** IN-SILICO_ANNOTATION
+
** 3 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_6196]]
−
* [[Tiso_gene_17987]]
+
*** [[Tiso_gene_14398]]
−
** IN-SILICO_ANNOTATION
+
*** [[Tiso_gene_15790]]
−
***EC-NUMBER
+
** 2 reconstruction source(s) associated:
−
* [[Tiso_gene_12712]]
+
*** [[annotation-in-silico_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** [[orthology-esiliculosus]]
−
***EC-NUMBER
+
* [[PWY-5651]]
−
** [[pantograph]]-[[esiliculosus]]
+
** 0 associated gene:
−
* [[Tiso_gene_2578]]
+
* [[PWY-5652]]
−
** [[pantograph]]-[[esiliculosus]]
+
** 0 associated gene:
−
* [[Tiso_gene_3693]]
+
* [[RXN-10721]]
−
** IN-SILICO_ANNOTATION
+
** 1 associated gene(s):
−
***EC-NUMBER
+
*** [[Tiso_gene_15680]]
−
* [[Tiso_gene_20064]]
+
** 1 reconstruction source(s) associated:
−
** EXPERIMENTAL_ANNOTATION
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*** [[orthology-esiliculosus]]
−
***AUTOMATED-NAME-MATCH
+
== Reaction(s) not found ==
−
** [[pantograph]]-[[esiliculosus]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
−
* [[Tiso_gene_13113]]
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* [http://metacyc.org/META/NEW-IMAGE?object=PWY-6504 PWY-6504]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10720 RXN-10720]
−
***EC-NUMBER
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10722 RXN-10722]
−
* [[Tiso_gene_12920]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10723 RXN-10723]
−
** IN-SILICO_ANNOTATION
+
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-8665 RXN-8665]
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_15176]]
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_19083]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
== Pathways  ==
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-40674}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R02585 R02585]
+
{{#set: common name=L-tryptophan degradation XI (mammalian, via kynurenine)}}
−
* UNIPROT:
+
{{#set: reaction found=9}}
−
** [http://www.uniprot.org/uniprot/P06800 P06800]
+
{{#set: total reaction=17}}
−
** [http://www.uniprot.org/uniprot/P20483 P20483]
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{{#set: completion rate=53.0}}
−
** [http://www.uniprot.org/uniprot/P23748 P23748]
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−
** [http://www.uniprot.org/uniprot/P20417 P20417]
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−
** [http://www.uniprot.org/uniprot/P18433 P18433]
+
−
** [http://www.uniprot.org/uniprot/P24666 P24666]
+
−
** [http://www.uniprot.org/uniprot/Q06180 Q06180]
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−
** [http://www.uniprot.org/uniprot/P30307 P30307]
+
−
** [http://www.uniprot.org/uniprot/P25044 P25044]
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−
** [http://www.uniprot.org/uniprot/P27574 P27574]
+
−
** [http://www.uniprot.org/uniprot/P29074 P29074]
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−
** [http://www.uniprot.org/uniprot/P26045 P26045]
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−
** [http://www.uniprot.org/uniprot/P35234 P35234]
+
−
** [http://www.uniprot.org/uniprot/P35832 P35832]
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−
** [http://www.uniprot.org/uniprot/P30304 P30304]
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−
** [http://www.uniprot.org/uniprot/Q03019 Q03019]
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−
** [http://www.uniprot.org/uniprot/P11064 P11064]
+
−
** [http://www.uniprot.org/uniprot/P30306 P30306]
+
−
** [http://www.uniprot.org/uniprot/P30309 P30309]
+
−
** [http://www.uniprot.org/uniprot/P43378 P43378]
+
−
** [http://www.uniprot.org/uniprot/P29349 P29349]
+
−
** [http://www.uniprot.org/uniprot/P29351 P29351]
+
−
** [http://www.uniprot.org/uniprot/Q9W0G1 Q9W0G1]
+
−
** [http://www.uniprot.org/uniprot/P23471 P23471]
+
−
** [http://www.uniprot.org/uniprot/P35235 P35235]
+
−
** [http://www.uniprot.org/uniprot/P08575 P08575]
+
−
** [http://www.uniprot.org/uniprot/P18052 P18052]
+
−
** [http://www.uniprot.org/uniprot/P35822 P35822]
+
−
** [http://www.uniprot.org/uniprot/P23470 P23470]
+
−
** [http://www.uniprot.org/uniprot/P34138 P34138]
+
−
** [http://www.uniprot.org/uniprot/Q24495 Q24495]
+
−
** [http://www.uniprot.org/uniprot/Q9W4F5 Q9W4F5]
+
−
** [http://www.uniprot.org/uniprot/Q15426 Q15426]
+
−
** [http://www.uniprot.org/uniprot/P41499 P41499]
+
−
** [http://www.uniprot.org/uniprot/Q28613 Q28613]
+
−
** [http://www.uniprot.org/uniprot/Q28182 Q28182]
+
−
** [http://www.uniprot.org/uniprot/P15273 P15273]
+
−
** [http://www.uniprot.org/uniprot/Q91870 Q91870]
+
−
** [http://www.uniprot.org/uniprot/Q91976 Q91976]
+
−
** [http://www.uniprot.org/uniprot/Q12923 Q12923]
+
−
** [http://www.uniprot.org/uniprot/P41893 P41893]
+
−
** [http://www.uniprot.org/uniprot/Q62132 Q62132]
+
−
** [http://www.uniprot.org/uniprot/Q92124 Q92124]
+
−
** [http://www.uniprot.org/uniprot/P23468 P23468]
+
−
** [http://www.uniprot.org/uniprot/Q62917 Q62917]
+
−
** [http://www.uniprot.org/uniprot/Q64696 Q64696]
+
−
** [http://www.uniprot.org/uniprot/P40347 P40347]
+
−
** [http://www.uniprot.org/uniprot/P16620 P16620]
+
−
** [http://www.uniprot.org/uniprot/P30305 P30305]
+
−
** [http://www.uniprot.org/uniprot/P29352 P29352]
+
−
** [http://www.uniprot.org/uniprot/Q05909 Q05909]
+
−
** [http://www.uniprot.org/uniprot/Q91871 Q91871]
+
−
** [http://www.uniprot.org/uniprot/P49446 P49446]
+
−
** [http://www.uniprot.org/uniprot/Q9CDL7 Q9CDL7]
+
−
** [http://www.uniprot.org/uniprot/P30311 P30311]
+
−
** [http://www.uniprot.org/uniprot/Q64487 Q64487]
+
−
** [http://www.uniprot.org/uniprot/Q9JU65 Q9JU65]
+
−
** [http://www.uniprot.org/uniprot/P35992 P35992]
+
−
** [http://www.uniprot.org/uniprot/P0AAB2 P0AAB2]
+
−
** [http://www.uniprot.org/uniprot/Q9PN39 Q9PN39]
+
−
** [http://www.uniprot.org/uniprot/Q16825 Q16825]
+
−
** [http://www.uniprot.org/uniprot/Q12913 Q12913]
+
−
** [http://www.uniprot.org/uniprot/P48967 P48967]
+
−
** [http://www.uniprot.org/uniprot/Q60998 Q60998]
+
−
** [http://www.uniprot.org/uniprot/Q90815 Q90815]
+
−
** [http://www.uniprot.org/uniprot/Q90816 Q90816]
+
−
** [http://www.uniprot.org/uniprot/Q90817 Q90817]
+
−
** [http://www.uniprot.org/uniprot/P30310 P30310]
+
−
** [http://www.uniprot.org/uniprot/Q62604 Q62604]
+
−
** [http://www.uniprot.org/uniprot/Q64605 Q64605]
+
−
** [http://www.uniprot.org/uniprot/Q05209 Q05209]
+
−
** [http://www.uniprot.org/uniprot/Q60673 Q60673]
+
−
** [http://www.uniprot.org/uniprot/Q62130 Q62130]
+
−
** [http://www.uniprot.org/uniprot/Q15678 Q15678]
+
−
** [http://www.uniprot.org/uniprot/Q92932 Q92932]
+
−
** [http://www.uniprot.org/uniprot/Q90687 Q90687]
+
−
** [http://www.uniprot.org/uniprot/P79923 P79923]
+
−
** [http://www.uniprot.org/uniprot/O00197 O00197]
+
−
** [http://www.uniprot.org/uniprot/Q61042 Q61042]
+
−
** [http://www.uniprot.org/uniprot/Q9ERM5 Q9ERM5]
+
−
** [http://www.uniprot.org/uniprot/P35236 P35236]
+
−
** [http://www.uniprot.org/uniprot/P35821 P35821]
+
−
** [http://www.uniprot.org/uniprot/Q06124 Q06124]
+
−
** [http://www.uniprot.org/uniprot/O13016 O13016]
+
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** [http://www.uniprot.org/uniprot/P23467 P23467]
+
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** [http://www.uniprot.org/uniprot/P23469 P23469]
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** [http://www.uniprot.org/uniprot/P35233 P35233]
+
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** [http://www.uniprot.org/uniprot/P30634 P30634]
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−
** [http://www.uniprot.org/uniprot/P28827 P28827]
+
−
** [http://www.uniprot.org/uniprot/P28828 P28828]
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−
** [http://www.uniprot.org/uniprot/Q64497 Q64497]
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−
** [http://www.uniprot.org/uniprot/P29350 P29350]
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−
** [http://www.uniprot.org/uniprot/P30303 P30303]
+
−
** [http://www.uniprot.org/uniprot/P32586 P32586]
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−
** [http://www.uniprot.org/uniprot/P32587 P32587]
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−
** [http://www.uniprot.org/uniprot/Q02256 Q02256]
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** [http://www.uniprot.org/uniprot/Q8VBV0 Q8VBV0]
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** [http://www.uniprot.org/uniprot/Q8R169 Q8R169]
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** [http://www.uniprot.org/uniprot/Q64512 Q64512]
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** [http://www.uniprot.org/uniprot/Q29029 Q29029]
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** [http://www.uniprot.org/uniprot/P38148 P38148]
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** [http://www.uniprot.org/uniprot/Q64604 Q64604]
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** [http://www.uniprot.org/uniprot/Q63745 Q63745]
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** [http://www.uniprot.org/uniprot/P39155 P39155]
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** [http://www.uniprot.org/uniprot/Q64494 Q64494]
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** [http://www.uniprot.org/uniprot/Q62728 Q62728]
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** [http://www.uniprot.org/uniprot/Q64502 Q64502]
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** [http://www.uniprot.org/uniprot/Q64504 Q64504]
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** [http://www.uniprot.org/uniprot/Q46630 Q46630]
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** [http://www.uniprot.org/uniprot/Q17024 Q17024]
+
−
** [http://www.uniprot.org/uniprot/P35831 P35831]
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−
** [http://www.uniprot.org/uniprot/Q00684 Q00684]
+
−
** [http://www.uniprot.org/uniprot/Q16827 Q16827]
+
−
** [http://www.uniprot.org/uniprot/P06652 P06652]
+
−
** [http://www.uniprot.org/uniprot/P29461 P29461]
+
−
** [http://www.uniprot.org/uniprot/Q29500 Q29500]
+
−
** [http://www.uniprot.org/uniprot/Q62370 Q62370]
+
−
** [http://www.uniprot.org/uniprot/Q92735 Q92735]
+
−
** [http://www.uniprot.org/uniprot/Q45408 Q45408]
+
−
** [http://www.uniprot.org/uniprot/O82710 O82710]
+
−
** [http://www.uniprot.org/uniprot/O88488 O88488]
+
−
** [http://www.uniprot.org/uniprot/O88902 O88902]
+
−
** [http://www.uniprot.org/uniprot/O94044 O94044]
+
−
** [http://www.uniprot.org/uniprot/O44329 O44329]
+
−
** [http://www.uniprot.org/uniprot/O76282 O76282]
+
−
** [http://www.uniprot.org/uniprot/Q98936 Q98936]
+
−
** [http://www.uniprot.org/uniprot/Q91054 Q91054]
+
−
** [http://www.uniprot.org/uniprot/Q22582 Q22582]
+
−
** [http://www.uniprot.org/uniprot/Q39491 Q39491]
+
−
** [http://www.uniprot.org/uniprot/O65190 O65190]
+
−
** [http://www.uniprot.org/uniprot/P16621 P16621]
+
−
** [http://www.uniprot.org/uniprot/P10586 P10586]
+
−
** [http://www.uniprot.org/uniprot/Q64224 Q64224]
+
−
** [http://www.uniprot.org/uniprot/P18031 P18031]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: common name=map_kinase_phosphatase_1}}
+
−
{{#set: common name=dual_specificity_protein_phosphatase_cdc14a}}
+
−
{{#set: common name=tyrosine_phosphatase_family_protein}}
+
−
{{#set: common name=dual_specificity_phosphatase}}
+
−
{{#set: common name=receptor-type_tyrosine-protein_phosphatase_delta-_partial}}
+
−
{{#set: common name=probable_tyrosine-protein_phosphatase_dg1060}}
+
−
{{#set: ec number=EC-3.1.3.48}}
+
−
{{#set: gene associated=Tiso_gene_8252|Tiso_gene_807|Tiso_gene_13635|Tiso_gene_3751|Tiso_gene_4164|Tiso_gene_19716|Tiso_gene_3461|Tiso_gene_16782|Tiso_gene_17987|Tiso_gene_12712|Tiso_gene_2578|Tiso_gene_3693|Tiso_gene_20064|Tiso_gene_13113|Tiso_gene_12920|Tiso_gene_15176|Tiso_gene_19083}}
+
−
{{#set: in pathway=}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:00, 18 March 2018

Pathway PWY-6309

  • taxonomic range:
  • common name:
    • L-tryptophan degradation XI (mammalian, via kynurenine)
  • Synonym(s):

Reaction(s) found

9 reactions found over 17 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_8543&oldid=21201"