Difference between revisions of "Tiso gene 5934"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate_dehydrogenase_e1_c...")
(Created page with "Category:Gene == Gene Tiso_gene_14008 == * left end position: ** 2741 * transcription direction: ** POSITIVE * right end position: ** 5798 * centisome position: ** 46.3319...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
+
== Gene Tiso_gene_14008 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 2741
−
* common name:
+
* transcription direction:
−
** pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial
+
** POSITIVE
−
** dihydrolipoamide_acetyltransferase
+
* right end position:
−
** ORF
+
** 5798
−
* ec number:
+
* centisome position:
−
** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
+
** 46.33198   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* [[ISOCIT-CLEAV-RXN]]
−
** 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
+
** in-silico_annotation
−
* With common name(s):
+
***automated-name-match
−
** 1 pyruvate[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 H+[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
+
** experimental_annotation
−
 
+
***automated-name-match
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[Tiso_gene_6983]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_17539]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2693]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
−
* [[Tiso_gene_7519]]
+
−
** IN-SILICO_ANNOTATION
+
−
***EC-NUMBER
+
−
** [[pantograph]]-[[esiliculosus]]
+
−
* [[Tiso_gene_2515]]
+
−
** EXPERIMENTAL_ANNOTATION
+
−
***EC-NUMBER
+
 
** [[pantograph]]-[[esiliculosus]]
 
** [[pantograph]]-[[esiliculosus]]
−
== Pathways ==
+
== Pathways associated ==
−
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
+
* [[P105-PWY]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[GLYOXYLATE-BYPASS]]
−
== Reconstruction information  ==
+
* [[PWY-6969]]
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[esiliculosus]]
+
−
* [[manual]]:
+
−
** [[primary_network]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[experimental_annotation]]
+
−
*** [[in-silico_annotation]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=2741}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
+
{{#set: transcription direction=POSITIVE}}
−
* UNIPROT:
+
{{#set: right end position=5798}}
−
** [http://www.uniprot.org/uniprot/P06959 P06959]
+
{{#set: centisome position=46.33198    }}
−
** [http://www.uniprot.org/uniprot/P26267 P26267]
+
{{#set: reaction associated=ISOCIT-CLEAV-RXN}}
−
** [http://www.uniprot.org/uniprot/P35485 P35485]
+
{{#set: pathway associated=P105-PWY|GLYOXYLATE-BYPASS|PWY-6969}}
−
** [http://www.uniprot.org/uniprot/Q59097 Q59097]
+
−
** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
+
−
** [http://www.uniprot.org/uniprot/P45119 P45119]
+
−
** [http://www.uniprot.org/uniprot/P11966 P11966]
+
−
** [http://www.uniprot.org/uniprot/P35488 P35488]
+
−
** [http://www.uniprot.org/uniprot/P47515 P47515]
+
−
** [http://www.uniprot.org/uniprot/P21882 P21882]
+
−
** [http://www.uniprot.org/uniprot/P47516 P47516]
+
−
** [http://www.uniprot.org/uniprot/P21881 P21881]
+
−
** [http://www.uniprot.org/uniprot/P21873 P21873]
+
−
** [http://www.uniprot.org/uniprot/P16387 P16387]
+
−
** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
+
−
** [http://www.uniprot.org/uniprot/P08559 P08559]
+
−
** [http://www.uniprot.org/uniprot/P11177 P11177]
+
−
** [http://www.uniprot.org/uniprot/P29803 P29803]
+
−
** [http://www.uniprot.org/uniprot/P29804 P29804]
+
−
** [http://www.uniprot.org/uniprot/P26284 P26284]
+
−
** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
+
−
** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
+
−
** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
+
−
** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
+
−
** [http://www.uniprot.org/uniprot/Q09171 Q09171]
+
−
** [http://www.uniprot.org/uniprot/P52901 P52901]
+
−
** [http://www.uniprot.org/uniprot/P79931 P79931]
+
−
** [http://www.uniprot.org/uniprot/P79932 P79932]
+
−
** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
+
−
** [http://www.uniprot.org/uniprot/P10801 P10801]
+
−
** [http://www.uniprot.org/uniprot/P21874 P21874]
+
−
** [http://www.uniprot.org/uniprot/P49432 P49432]
+
−
** [http://www.uniprot.org/uniprot/Q59820 Q59820]
+
−
** [http://www.uniprot.org/uniprot/P35486 P35486]
+
−
** [http://www.uniprot.org/uniprot/P35487 P35487]
+
−
** [http://www.uniprot.org/uniprot/Q06437 Q06437]
+
−
** [http://www.uniprot.org/uniprot/P32473 P32473]
+
−
** [http://www.uniprot.org/uniprot/Q59107 Q59107]
+
−
** [http://www.uniprot.org/uniprot/P73405 P73405]
+
−
** [http://www.uniprot.org/uniprot/Q49109 Q49109]
+
−
** [http://www.uniprot.org/uniprot/O48685 O48685]
+
−
** [http://www.uniprot.org/uniprot/P52902 P52902]
+
−
** [http://www.uniprot.org/uniprot/P52904 P52904]
+
−
** [http://www.uniprot.org/uniprot/P52903 P52903]
+
−
** [http://www.uniprot.org/uniprot/O66112 O66112]
+
−
** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
+
−
** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
+
−
** [http://www.uniprot.org/uniprot/O69478 O69478]
+
−
** [http://www.uniprot.org/uniprot/P10802 P10802]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=pyruvate_dehydrogenase_e1_component_subunit_alpha-_mitochondrial}}
+
−
{{#set: common name=dihydrolipoamide_acetyltransferase}}
+
−
{{#set: common name=ORF}}
+
−
{{#set: ec number=EC-1.2.4.1}}
+
−
{{#set: gene associated=Tiso_gene_6983|Tiso_gene_17539|Tiso_gene_2693|Tiso_gene_7519|Tiso_gene_2515}}
+
−
{{#set: in pathway=PYRUVDEHYD-PWY}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=esiliculosus}}
+
−
{{#set: reconstruction category=manual}}
+
−
{{#set: reconstruction source=primary_network}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=experimental_annotation|in-silico_annotation}}
+

Revision as of 18:21, 18 March 2018

Gene Tiso_gene_14008

  • left end position:
    • 2741
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5798
  • centisome position:
    • 46.33198
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_5934&oldid=23702"