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| Line 1: |
Line 1: |
| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOADEHYDROG-RXN ACYLCOADEHYDROG-RXN] == | + | == Gene Tiso_gene_15143 == |
| − | * direction: | + | * right end position: |
| − | ** LEFT-TO-RIGHT | + | ** 5037 |
| − | * common name: | + | * transcription direction: |
| − | ** acyl-_dehydrogenase | + | ** POSITIVE |
| − | ** Acyl-CoA dehydrogenase | + | * left end position: |
| − | ** acyl-CoA_dehydrogenase | + | ** 3727 |
| − | * ec number: | + | * centisome position: |
| − | ** [http://enzyme.expasy.org/EC/1.3.8 EC-1.3.8] | + | ** 71.57673 |
| | * Synonym(s): | | * Synonym(s): |
| − | ** fatty acyl coenzyme A dehydrogenase
| |
| − | ** acyl coenzyme A dehydrogenase
| |
| − | ** fatty-acyl-CoA dehydrogenase
| |
| − | ** general acyl CoA dehydrogenase
| |
| − | ** medium-chain acyl-coenzyme A dehydrogenase
| |
| − | ** long-chain acyl coenzyme A dehydrogenase
| |
| − | ** long-chain acyl-CoA dehydrogenase
| |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[2.7.1.127-RXN]] |
| − | ** 1 [[ETF-Oxidized]][c] '''+''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ETF-Reduced]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
| + | |
| − | * With common name(s):
| + | |
| − | ** 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 H+[c] '''=>''' 1 a reduced electron-transfer flavoprotein[c] '''+''' 1 a trans-2-enoyl-CoA[c]
| + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[Tiso_gene_5449]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_16631]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_8271]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[Tiso_gene_6295]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_8272]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_7447]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_10643]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_883]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_14511]]
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_6475]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | * [[Tiso_gene_16113]]
| + | |
| − | ** IN-SILICO_ANNOTATION
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | ** [[pantograph]]-[[esiliculosus]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
| + | |
| − | ** '''5''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * Category: [[orthology]]
| + | |
| − | ** Source: [[orthology-esiliculosus]]
| + | |
| − | *** Tool: [[pantograph]]
| + | |
| − | * Category: [[annotation]]
| + | |
| | ** Source: [[annotation-in-silico_annotation]] | | ** Source: [[annotation-in-silico_annotation]] |
| − | *** Tool: [[pathwaytools]] | + | *** Assignment: ec-number |
| | + | == Pathways associated == |
| | + | * [[PWY-6364]] |
| | + | * [[PWY-6362]] |
| | + | * [[PWY-6361]] |
| | == External links == | | == External links == |
| − | * UNIPROT:
| + | {{#set: right end position=5037}} |
| − | ** [http://www.uniprot.org/uniprot/P16219 P16219]
| + | {{#set: transcription direction=POSITIVE}} |
| − | ** [http://www.uniprot.org/uniprot/P45952 P45952]
| + | {{#set: left end position=3727}} |
| − | ** [http://www.uniprot.org/uniprot/P15651 P15651]
| + | {{#set: centisome position=71.57673 }} |
| − | ** [http://www.uniprot.org/uniprot/P11310 P11310]
| + | {{#set: reaction associated=2.7.1.127-RXN}} |
| − | ** [http://www.uniprot.org/uniprot/P08503 P08503]
| + | {{#set: pathway associated=PWY-6364|PWY-6362|PWY-6361}} |
| − | ** [http://www.uniprot.org/uniprot/Q07417 Q07417]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q54857 Q54857]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P45867 P45867]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X3R3 Q9X3R3]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9R9I6 Q9R9I6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q96329 Q96329]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=acyl-_dehydrogenase}} | + | |
| − | {{#set: common name=Acyl-CoA dehydrogenase}} | + | |
| − | {{#set: common name=acyl-CoA_dehydrogenase}} | + | |
| − | {{#set: ec number=EC-1.3.8}} | + | |
| − | {{#set: common name=fatty acyl coenzyme A dehydrogenase|acyl coenzyme A dehydrogenase|fatty-acyl-CoA dehydrogenase|general acyl CoA dehydrogenase|medium-chain acyl-coenzyme A dehydrogenase|long-chain acyl coenzyme A dehydrogenase|long-chain acyl-CoA dehydrogenase}}
| + | |
| − | {{#set: gene associated=Tiso_gene_5449|Tiso_gene_16631|Tiso_gene_8271|Tiso_gene_6295|Tiso_gene_8272|Tiso_gene_7447|Tiso_gene_10643|Tiso_gene_883|Tiso_gene_14511|Tiso_gene_6475|Tiso_gene_16113}} | + | |
| − | {{#set: in pathway=FAO-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology|annotation}}
| + | |
| − | {{#set: reconstruction source=annotation-in-silico_annotation|orthology-esiliculosus}}
| + | |
| − | {{#set: reconstruction tool=pantograph|pathwaytools}}
| + | |
