Semantic search

	Common name	Ec number	Reconstruction category	Reconstruction tool	Reconstruction source	Gene associated	In pathway
2.7.1.133-RXN	Ras-related gtp-binding protein	EC-2.7.1.159	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15232	PWY-6366 PWY-6365 PWY-6362 PWY-6554
2.7.1.134-RXN	Ras-related gtp-binding protein	EC-2.7.1.134	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15232	PWY-6365 PWY-4661
2.7.1.139-RXN	Ras-related gtp-binding protein	EC-2.7.1.159	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 15232	PWY-6554
2.7.1.140-RXN		EC-2.7.1.140	Annotation	Pathwaytools	Annotation-in-silico annotation		PWY-6366 PWY-6372 PWY-6365 PWY-6362 PWY-6554
2.7.1.148-RXN	4-diphosphocytidyl-2-c-methyl-d-erythritol kinase	EC-2.7.1.148	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 13463	NONMEVIPP-PWY PWY-7560
2.7.1.149-RXN		EC-2.7.1.149	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		PWY-6367 PWY-6351
2.7.1.160-RXN	Putative tRNA 2'-phosphotransferase	EC-2.7.1.160	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 17372	PWY-6689
2.7.1.68-RXN	1-phosphatidylinositol-4-phosphate 5-kinase ORF Phosphatidylinositol-4-phosphate 5-kinase Phosphatidylinositol4phosphate5kinase	EC-2.7.1.68	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 9590 Tiso gene 14055 Tiso gene 14966 Tiso gene 2021 Tiso gene 7487 Tiso gene 15721 Tiso gene 1131 Tiso gene 2008 Tiso gene 18887 Tiso gene 17887 Tiso gene 9249 Tiso gene 730 Tiso gene 2350 Tiso gene 15722 Tiso gene 17532 Tiso gene 11381	PWY-6352 PWY-6351
2.7.1.90-RXN	ORF	EC-2.7.1.90	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 596	PWY-1042
2.7.10.1-RXN	ORF	EC-2.7.10.2 EC-2.7.12.1 EC-2.7.10.1	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 6071 Tiso gene 2393 Tiso gene 14940 Tiso gene 10355 Tiso gene 12229 Tiso gene 14941 Tiso gene 5584 Tiso gene 9800 Tiso gene 17047 Tiso gene 18523 Tiso gene 15652 Tiso gene 1810 Tiso gene 17980 Tiso gene 10356 Tiso gene 1492
2.7.11.18-RXN	Myosin light chain kinase	EC-2.7.11.18	Annotation	Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation	Tiso gene 4338 Tiso gene 4337 Tiso gene 6216
2.7.11.2-RXN	Pyruvate dehydrogenase kinase Pyruvate dehydrogenasekinase	EC-2.7.11.2	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 20269 Tiso gene 12579 Tiso gene 20270
2.7.11.20-RXN	Eukaryotic elongation factor 2 kinase	EC-2.7.11.20	Annotation	Pathwaytools	Annotation-experimental annotation	Tiso gene 15126
2.7.11.22-RXN			Orthology	Pantograph	Orthology-esiliculosus	Tiso gene 19151 Tiso gene 7932
2.7.11.24-RXN	Mitogen activatedproteinkinase Extracellular response kinase Mitogenactivated protein kinase Mitogen-activated protein kinase ORF	EC-2.7.11.24	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 7161 Tiso gene 15329 Tiso gene 169 Tiso gene 1338 Tiso gene 10060 Tiso gene 2152 Tiso gene 15060 Tiso gene 8480 Tiso gene 9582 Tiso gene 10793 Tiso gene 10792 Tiso gene 19611
2.7.12.1-RXN	ORF	EC-2.7.11.11 EC-2.7.12.1	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 1810
2.7.12.2-RXN	Map kinase kinase	EC-2.7.12.2	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 18334
2.7.13.3-RXN		EC-2.7.13.3	Orthology	Pantograph	Orthology-esiliculosus	Tiso gene 3454 Tiso gene 1942 Tiso gene 20472 Tiso gene 5545
2.7.7.11-RXN	Dp-n-acetylglucosamine pyrophosphorylase	EC-2.7.7.11	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 6457 Tiso gene 6459 Tiso gene 6458
2.7.7.13-RXN		EC-2.7.7.13	Orthology	Pantograph	Orthology-synechocystis	Tiso gene 14704	PWY-5659 PWY-882
2.7.7.14-RXN	Ctp-phosphoethanolamine cytidylyltransferase	EC-2.7.7.14	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 18070	PWY-7782 PWY4FS-6
2.7.7.44-RXN	Dp-n-acetylglucosamine pyrophosphorylase	EC-2.7.7.44	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 6458 Tiso gene 6459 Tiso gene 6457	PWY-4841
2.7.7.60-RXN	2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase 4-diphosphocytidyl-2-methylerithritol synthase (sugar nucleotide phosphorylase family)	EC-2.7.7.60	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 17568	NONMEVIPP-PWY PWY-7560
2.7.7.8-RXN	Polynucleotide phosphorylase polyadenylase	EC-2.7.7.8	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 2987
2.7.8.11-RXN		EC-2.7.8.11	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 6541	PHOSLIPSYN2-PWY PWY-7625 PWY-6351 PWY-6352
2.7.8.15-RXN		EC-2.7.8.15	Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 1604	MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
2.7.8.23-RXN		EC-2.7.8.23	Orthology	Pantograph	Orthology-esiliculosus	Tiso gene 2241
2.7.8.24-RXN		EC-2.7.8.24	Gap-filling	Meneco	Gap-filling-gapfilling solution with meneco draft medium		PWY-6826
2.7.9.3-RXN	Selenophosphate synthetase	EC-2.7.9.3	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 5668 Tiso gene 5669 Tiso gene 14608	PWY0-901 PWY-6281
2.8.1.6-RXN	Biotin synthase	EC-2.8.1.6	Orthology Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 10345	PWY0-1507 PWY-7380
2KETO-3METHYLVALERATE-RXN	(S)-3-methyl-2-oxopentanoate dehydrogenase (acylating)	EC-1.2.1	Orthology	Pantograph	Orthology-creinhardtii	Tiso gene 3260 Tiso gene 18084 Tiso gene 11793	PWY-5108 ILEUDEG-PWY
2KETO-4METHYL-PENTANOATE-DEHYDROG-RXN	4-methyl-2-oxopentanoate dehydrogenase (acylating)	EC-1.2.1	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation		LEU-DEG2-PWY
2OXOGLUTDECARB-RXN	Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase mitochondrial Oxoglutarate decarboxylase 2-oxoglutarate decarboxylation	EC-1.2.4.2	Manual Annotation	Pathwaytools	Annotation-experimental annotation Manual-primary network Annotation-in-silico annotation	Tiso gene 10209	PWY66-398 PWY-5084
2PGADEHYDRAT-RXN	Bifunctional enolase2transcriptionalactivator Bifunctional enolase 2 transcriptional activator Enolase 1	EC-4.2.1.11	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 5619 Tiso gene 13317 Tiso gene 14718 Tiso gene 8720	PWY-1042 P341-PWY PWY-2221 PWY-7124 PWY-1622 GLUCONEO-PWY GLYCOLYSIS NPGLUCAT-PWY ANAGLYCOLYSIS-PWY PWY-7218 PWY-6901 P124-PWY PWY-6886 PWY-5723 PWY-6142 P122-PWY PWY66-399 PWY-5484 PWY-7003
2TRANSKETO-RXN	Transketolase	EC-2.2.1.1	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-experimental annotation Orthology-athaliana Annotation-in-silico annotation Manual-primary network	Tiso gene 11559 Tiso gene 5008	PWY-6901 CALVIN-PWY P21-PWY PWY-5723 PWY-1861 P185-PWY NONOXIPENT-PWY
3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN	Ketopantoate hydroxymethyltransferase	EC-2.1.2.11	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-esiliculosus	Tiso gene 14465 Tiso gene 14466	PANTO-PWY
3-DEHYDROQUINATE-DEHYDRATASE-RXN	Pentafunctional protein	EC-4.2.1.10	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-in-silico annotation Manual-primary network Orthology-esiliculosus	Tiso gene 5619 Tiso gene 14718 Tiso gene 8720 Tiso gene 5753 Tiso gene 5752	PWY-6163 PWY-6416 QUINATEDEG-PWY PWY-6707
3-DEHYDROQUINATE-SYNTHASE-RXN	3-dehydroquinate synthase Pentafunctional protein	EC-4.2.3.4	Orthology Manual Annotation	Pantograph Pathwaytools	Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network Orthology-creinhardtii	Tiso gene 5753 Tiso gene 3446 Tiso gene 3445 Tiso gene 3974 Tiso gene 5752 Tiso gene 3447	PWY-6164
3-DEHYDROSPHINGANINE-REDUCTASE-RXN	3-ketodihydrosphingosine reductase	EC-1.1.1.102	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Annotation-in-silico annotation	Tiso gene 18518	PWY-5129 PWY3DJ-12 SPHINGOLIPID-SYN-PWY
3-HYDROXY-KYNURENINASE-RXN	Kynureninase	EC-3.7.1.3	Annotation	Pathwaytools	Annotation-in-silico annotation	Tiso gene 10684 Tiso gene 10685	PWY-5651 PWY-6309
3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN		EC-1.1.1.30	Orthology	Pantograph	Orthology-creinhardtii	Tiso gene 7191 Tiso gene 12472	PWY66-367 PWY66-368
3-HYDROXYBUTYRYL-COA-DEHYDROGENASE-RXN		EC-1.1.1.157	Orthology	Pantograph	Orthology-athaliana Orthology-creinhardtii Orthology-esiliculosus	Tiso gene 14026 Tiso gene 14027
3-HYDROXYDECANOYL-ACP-DEHYDR-RXN	Polyketide synthase	EC-2.3.1.86 EC-2.3.1.85 EC-4.2.1.59	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 136 Tiso gene 500 Tiso gene 6884 Tiso gene 135 Tiso gene 10876 Tiso gene 13394	FASYN-ELONG-PWY
3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN	3-hydroxyisobutyrate mitochondrial 3-hydroxyisobutyrate dehydrogenase Uncharacterized oxidoreductase	EC-1.1.1.31	Orthology Annotation	Pantograph Pathwaytools	Orthology-creinhardtii Orthology-athaliana Annotation-in-silico annotation Orthology-esiliculosus Annotation-experimental annotation	Tiso gene 19590 Tiso gene 5857 Tiso gene 19771 Tiso gene 7107 Tiso gene 19772 Tiso gene 19592	VALDEG-PWY
3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN	Enoyl- hydratase	EC-3.1.2.4	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-creinhardtii Annotation-experimental annotation	Tiso gene 2224	VALDEG-PWY
3-ISOPROPYLMALDEHYDROG-RXN	3-isopropylmalate dehydrogenase Β-isopropylmalic enzyme Threo-Ds-3-isopropylmalate dehydrogenase		Orthology Annotation	Pantograph Pathwaytools	Orthology-athaliana Annotation-experimental annotation Orthology-synechocystis Orthology-esiliculosus	Tiso gene 2920	LEUSYN-PWY PWY-6871
3-ISOPROPYLMALISOM-RXN	3-isopropylmalate dehydratase ORF (2R,3S)-3-isopropylmalate hydro-lyase Β-isopropylmalate dehydratase Α-isopropylmalate isomerase 3-isopropylmalate hydro-lyase		Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Orthology-athaliana Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 12778	LEUSYN-PWY PWY-6871
3-OXOACID-COA-TRANSFERASE-RXN	Succinyl- :3-ketoacid-coenzyme a transferase mitochondrial	EC-2.8.3.5	Annotation	Pathwaytools	Annotation-experimental annotation Annotation-in-silico annotation	Tiso gene 6754
3-OXOACYL-ACP-REDUCT-RXN	Polyketide synthase 3-oxoacyl-(acyl-carrier-protein)	EC-2.3.1.86 EC-2.3.1.85 EC-1.1.1.100	Orthology Annotation	Pantograph Pathwaytools	Annotation-in-silico annotation Annotation-experimental annotation Orthology-esiliculosus	Tiso gene 10876 Tiso gene 13394 Tiso gene 9885 Tiso gene 135 Tiso gene 13083 Tiso gene 136 Tiso gene 500	FASYN-ELONG-PWY
3-OXOACYL-ACP-SYNTH-BASE-RXN	3-oxoacyl-synthase Polyketide synthase	EC-2.3.1.86 EC-2.3.1.85 EC-2.3.1.41	Orthology Manual Annotation	Pantograph Pathwaytools	Annotation-experimental annotation Orthology-esiliculosus Annotation-in-silico annotation Orthology-athaliana Orthology-synechocystis Manual-primary network	Tiso gene 19302 Tiso gene 136 Tiso gene 14485 Tiso gene 13394 Tiso gene 5939 Tiso gene 135 Tiso gene 10876 Tiso gene 500 Tiso gene 15991	PWY-5965 PWY-5966 FASYN-INITIAL-PWY PWY-7388

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