Difference between revisions of "Tiso gene 11793"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPDECARBOX-RXN ASPDECARBOX-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.ex...")
(Created page with "Category:Gene == Gene Tiso_gene_11793 == * right end position: ** 7522 * transcription direction: ** NEGATIVE * left end position: ** 5188 * centisome position: ** 68.9435...")
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPDECARBOX-RXN ASPDECARBOX-RXN] ==
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== Gene Tiso_gene_11793 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7522
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/4.1.1.11 EC-4.1.1.11]
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** NEGATIVE
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* left end position:
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** 5188
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* centisome position:
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** 68.94353   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.25-RXN]]
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** 1 [[L-ASPARTATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[B-ALANINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 L-aspartate[c] '''+''' 1 H+[c] '''=>''' 1 β-alanine[c] '''+''' 1 CO2[c]
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* Reaction: [[1.2.4.4-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[2.3.1.168-RXN]]
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* Gene: [[Tiso_gene_9927]]
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** Source: [[annotation-in-silico_annotation]]
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** Source: [[orthology-synechocystis]]
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*** Assignment: automated-name-match
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== Pathways  ==
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* Reaction: [[2KETO-3METHYLVALERATE-RXN]]
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* [[PWY-5155]], β-alanine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5155 PWY-5155]
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** Source: [[orthology-creinhardtii]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* Reaction: [[DHRT_2mbcoa]]
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== Reconstruction information  ==
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** Source: [[orthology-creinhardtii]]
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* Category: [[orthology]]
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* Reaction: [[DHRT_ibcoa]]
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** Source: [[orthology-synechocystis]]
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** Source: [[orthology-creinhardtii]]
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*** Tool: [[pantograph]]
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* Reaction: [[RXN-7719]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5046]]
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* [[VALDEG-PWY]]
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* [[ILEUDEG-PWY]]
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* [[PWY-5108]]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: right end position=7522}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19497 19497]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: left end position=5188}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00489 R00489]
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{{#set: centisome position=68.94353    }}
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* UNIPROT:
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{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|2KETO-3METHYLVALERATE-RXN|DHRT_2mbcoa|DHRT_ibcoa|RXN-7719}}
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** [http://www.uniprot.org/uniprot/P52999 P52999]
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{{#set: pathway associated=PWY-5046|VALDEG-PWY|ILEUDEG-PWY|PWY-5108}}
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** [http://www.uniprot.org/uniprot/O66773 O66773]
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** [http://www.uniprot.org/uniprot/Q9JZ56 Q9JZ56]
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** [http://www.uniprot.org/uniprot/P56065 P56065]
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** [http://www.uniprot.org/uniprot/P65660 P65660]
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** [http://www.uniprot.org/uniprot/P0A790 P0A790]
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** [http://www.uniprot.org/uniprot/Q9X037 Q9X037]
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** [http://www.uniprot.org/uniprot/Q9ZN30 Q9ZN30]
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** [http://www.uniprot.org/uniprot/Q9PIK3 Q9PIK3]
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** [http://www.uniprot.org/uniprot/Q9JU49 Q9JU49]
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** [http://www.uniprot.org/uniprot/Q9RWF1 Q9RWF1]
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** [http://www.uniprot.org/uniprot/Q55382 Q55382]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-4.1.1.11}}
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{{#set: gene associated=Tiso_gene_9927}}
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{{#set: in pathway=PWY-5155}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-synechocystis}}
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{{#set: reconstruction tool=pantograph}}
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Latest revision as of 21:17, 21 March 2018

Gene Tiso_gene_11793

  • right end position:
    • 7522
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5188
  • centisome position:
    • 68.94353
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_11793&oldid=47521"