Difference between revisions of "Tiso gene 3344"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11598 RXN-11598] == * direction: ** LEFT-TO-RIGHT * common name: ** ribosomal_rnasmallsubunitme...")
(Created page with "Category:Gene == Gene Tiso_gene_11793 == * right end position: ** 7522 * transcription direction: ** NEGATIVE * left end position: ** 5188 * centisome position: ** 68.9435...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-11598 RXN-11598] ==
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== Gene Tiso_gene_11793 ==
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* direction:
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* right end position:
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** LEFT-TO-RIGHT
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** 7522
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* common name:
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* transcription direction:
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** ribosomal_rnasmallsubunitmethyltransferasee
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** NEGATIVE
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* ec number:
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* left end position:
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** [http://enzyme.expasy.org/EC/2.1.1.193 EC-2.1.1.193]
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** 5188
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* centisome position:
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** 68.94353   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.2.1.25-RXN]]
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** 1 [[16S-rRNA-uracil1498]][c] '''+''' 1 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[16S-rRNA-N3-methyluracil1498]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c]
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** Source: [[annotation-in-silico_annotation]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 a uracil1498 in 16S rRNA[c] '''+''' 1 S-adenosyl-L-methionine[c] '''=>''' 1 H+[c] '''+''' 1 an N3-methyluracil1498 in 16S rRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c]
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* Reaction: [[1.2.4.4-RXN]]
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** Source: [[annotation-in-silico_annotation]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[2.3.1.168-RXN]]
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* [[Tiso_gene_17244]]
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** Source: [[annotation-in-silico_annotation]]
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** IN-SILICO_ANNOTATION
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*** Assignment: automated-name-match
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***AUTOMATED-NAME-MATCH
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* Reaction: [[2KETO-3METHYLVALERATE-RXN]]
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** EXPERIMENTAL_ANNOTATION
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** Source: [[orthology-creinhardtii]]
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***AUTOMATED-NAME-MATCH
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* Reaction: [[DHRT_2mbcoa]]
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== Pathways  ==
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** Source: [[orthology-creinhardtii]]
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== Reconstruction information  ==
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* Reaction: [[DHRT_ibcoa]]
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* Category: [[annotation]]
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** Source: [[orthology-creinhardtii]]
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** Source: [[annotation-experimental_annotation]]
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* Reaction: [[RXN-7719]]
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*** Tool: [[pathwaytools]]
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** Source: [[annotation-in-silico_annotation]]
 
** Source: [[annotation-in-silico_annotation]]
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*** Tool: [[pathwaytools]]
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*** Assignment: automated-name-match
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== Pathways associated ==
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* [[PWY-5046]]
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* [[VALDEG-PWY]]
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* [[ILEUDEG-PWY]]
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* [[PWY-5108]]
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: right end position=7522}}
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{{#set: common name=ribosomal_rnasmallsubunitmethyltransferasee}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.1.1.193}}
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{{#set: left end position=5188}}
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{{#set: gene associated=Tiso_gene_17244}}
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{{#set: centisome position=68.94353    }}
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{{#set: in pathway=}}
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{{#set: reaction associated=1.2.1.25-RXN|1.2.4.4-RXN|2.3.1.168-RXN|2KETO-3METHYLVALERATE-RXN|DHRT_2mbcoa|DHRT_ibcoa|RXN-7719}}
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{{#set: reconstruction category=annotation}}
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{{#set: pathway associated=PWY-5046|VALDEG-PWY|ILEUDEG-PWY|PWY-5108}}
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{{#set: reconstruction source=annotation-experimental_annotation|annotation-in-silico_annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 17:00, 21 March 2018

Gene Tiso_gene_11793

  • right end position:
    • 7522
  • transcription direction:
    • NEGATIVE
  • left end position:
    • 5188
  • centisome position:
    • 68.94353
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_3344&oldid=37991"