RXN0-2161

Reaction RXN0-2161

• direction:
  • LEFT-TO-RIGHT
• common name:
  • serine--tRNA ligase, cytoplasmic
• ec number:
  • EC-6.1.1.11
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 SER[c] + 1 tRNA-Sec[c] + 1 ATP[c] => 1 L-seryl-SEC-tRNAs[c] + 1 PPI[c] + 1 AMP[c]
• With common name(s):
  • 1 L-serine[c] + 1 a tRNAsec[c] + 1 ATP[c] => 1 an L-seryl-[tRNAsec][c] + 1 diphosphate[c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: CHC_T00009366001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00009407001_1
  • Source: orthology-galdieria.sulphuraria
  • Source: orthology-ectocarpus_siliculosus
• Gene: CHC_T00009407001
  • Source: annotation-original_genome
    • Assignment: AUTOMATED-NAME-MATCH

Pathways

• PWY-6281, L-selenocysteine biosynthesis II (archaea and eukaryotes): PWY-6281
  • 2 reactions found over 4 reactions in the full pathway
• PWY0-901, L-selenocysteine biosynthesis I (bacteria): PWY0-901
  • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

• Category: orthology
  • Source: orthology-galdieria.sulphuraria
    • Tool: pantograph
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-original_genome
    • Tool: pathwaytools

External links

• LIGAND-RXN:
  • R08218