Difference between revisions of "PWY0-901"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15680 RXN-15680] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-benzyl-3,6-dihydroxy-6-(h...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-15680 RXN-15680] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY0-901 PWY0-901] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** 3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine glutathione S-transferase
+
** L-selenocysteine biosynthesis I (bacteria)
−
** Glutathione S-transferase
+
−
** microsomal glutathione S-transferase
+
−
* ec number:
+
−
** [http://enzyme.expasy.org/EC/2.5.1.18 EC-2.5.1.18]
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''2''' reactions found over '''3''' reactions in the full pathway
−
** 1 [[CPD-17045]][c] '''+''' 2 [[GLUTATHIONE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-17046]][c]
+
* [[2.7.9.3-RXN]]
−
* With common name(s):
+
** 1 associated gene(s):
−
** 1 3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine[c] '''+''' 2 glutathione[c] '''=>''' 2 H2O[c] '''+''' 1 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine[c]
+
*** [[CHC_T00005216001_1]]
−
 
+
** 2 reconstruction source(s) associated:
−
== Genes associated with this reaction  ==
+
*** [[orthology-ectocarpus_siliculosus]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008766001]]
+
* [[RXN0-2161]]
−
** ORIGINAL_GENOME
+
** 3 associated gene(s):
−
***AUTOMATED-NAME-MATCH
+
*** [[CHC_T00009407001]]
−
* [[CHC_T00009287001_1]]
+
*** [[CHC_T00009366001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
*** [[CHC_T00009407001_1]]
−
* [[CHC_T00009312001]]
+
** 3 reconstruction source(s) associated:
−
** ORIGINAL_GENOME
+
*** [[annotation-original_genome]]
−
***AUTOMATED-NAME-MATCH
+
*** [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00006560001_1]]
+
*** [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
== Reaction(s) not found ==
−
* [[CHC_T00008331001]]
+
* [http://metacyc.org/META/NEW-IMAGE?object=2.9.1.1-RXN 2.9.1.1-RXN]
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008425001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008810001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008791001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008274001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008724001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00003419001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008791001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009444001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009287001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009444001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008274001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009312001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008810001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
* [[PWY-7533]], gliotoxin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7533 PWY-7533]
+
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
* ECOCYC:
−
{{#set: common name=3-benzyl-3,6-dihydroxy-6-(hydroxymethyl)-diketopiperazine glutathione S-transferase}}
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY0-901 PWY0-901]
−
{{#set: common name=Glutathione S-transferase}}
+
* LIGAND-MAP:
−
{{#set: common name=microsomal glutathione S-transferase}}
+
** [http://www.genome.jp/dbget-bin/www_bget?map00970 map00970]
−
{{#set: ec number=EC-2.5.1.18}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: gene associated=CHC_T00008766001|CHC_T00009287001_1|CHC_T00009312001|CHC_T00006560001_1|CHC_T00008331001|CHC_T00008425001|CHC_T00008810001|CHC_T00008791001_1|CHC_T00008274001_1|CHC_T00008724001|CHC_T00003419001_1|CHC_T00008791001|CHC_T00009444001|CHC_T00009287001|CHC_T00009444001_1|CHC_T00008274001|CHC_T00009312001_1|CHC_T00008810001_1}}
+
{{#set: common name=L-selenocysteine biosynthesis I (bacteria)}}
−
{{#set: in pathway=PWY-7533}}
+
{{#set: reaction found=2}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: total reaction=3}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: completion rate=67.0}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Revision as of 15:38, 23 May 2018

Pathway PWY0-901

  • taxonomic range:
  • common name:
    • L-selenocysteine biosynthesis I (bacteria)
  • Synonym(s):

Reaction(s) found

2 reactions found over 3 reactions in the full pathway

Reaction(s) not found

External links



Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY0-901&oldid=14897"