Difference between revisions of "RXN-12583"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16998 RXN-16998] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoglucomutase * Synony...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate:thiamin diphosphat...") |
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| Line 1: | Line 1: | ||
[[Category:Reaction]] | [[Category:Reaction]] | ||
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN- | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12583 RXN-12583] == |
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
* common name: | * common name: | ||
| − | ** | + | ** pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating) |
| + | ** pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PROTON]][c] '''+''' 1 [[THIAMINE-PYROPHOSPHATE]][c] '''+''' 1 [[PYRUVATE]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[2-ALPHA-HYDROXYETHYL-THPP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 H+[c] '''+''' 1 thiamine diphosphate[c] '''+''' 1 pyruvate[c] '''=>''' 1 CO2[c] '''+''' 1 2-(α-hydroxyethyl)thiamine diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * [[ | + | * Gene: [[CHC_T00008732001]] |
| − | ** [[ | + | ** Source: [[annotation-original_genome]] |
| − | * [[ | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | ** | + | * Gene: [[CHC_T00008732001_1]] |
| − | + | ** Source: [[orthology-galdieria.sulphuraria]] | |
| − | * [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | ** [[ | + | ** Source: [[orthology-arabidopsis_thaliana]] |
| + | * Gene: [[CHC_T00008442001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| − | * [[orthology]]: | + | * Category: [[orthology]] |
| − | ** [[pantograph]]: | + | ** Source: [[orthology-arabidopsis_thaliana]] |
| − | *** [[galdieria.sulphuraria]] | + | *** Tool: [[pantograph]] |
| − | * [[ | + | ** Source: [[orthology-ectocarpus_siliculosus]] |
| − | ** [[ | + | *** Tool: [[pantograph]] |
| − | *** [[ | + | ** Source: [[orthology-galdieria.sulphuraria]] |
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00014 R00014] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | {{#set: common name= | + | {{#set: common name=pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)}} |
| − | {{#set: gene associated= | + | {{#set: common name=pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor}} |
| + | {{#set: gene associated=CHC_T00008732001|CHC_T00008732001_1|CHC_T00008442001_1}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
| − | {{#set: reconstruction category=orthology | + | {{#set: reconstruction category=orthology|annotation}} |
| − | + | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | |
| − | {{#set: reconstruction source=galdieria.sulphuraria | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | + | ||
| − | {{#set: reconstruction tool=pathwaytools | + | |
| − | + | ||
Revision as of 17:53, 23 May 2018
Contents
Reaction RXN-12583
- direction:
- LEFT-TO-RIGHT
- common name:
- pyruvate:thiamin diphosphate acetaldehydetransferase (decarboxylating)
- pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 THIAMINE-PYROPHOSPHATE[c] + 1 PYRUVATE[c] => 1 CARBON-DIOXIDE[c] + 1 2-ALPHA-HYDROXYETHYL-THPP[c]
- With common name(s):
- 1 H+[c] + 1 thiamine diphosphate[c] + 1 pyruvate[c] => 1 CO2[c] + 1 2-(α-hydroxyethyl)thiamine diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008732001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008732001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00008442001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- LIGAND-RXN:
