Difference between revisions of "2OXOGLUTDECARB-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTDECARB-RXN 2OXOGLUTDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** dihydroli...") |
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** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | * [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] | ||
** '''11''' reactions found over '''11''' reactions in the full pathway | ** '''11''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-5084]], 2-oxoglutarate decarboxylation to succinyl-CoA: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5084 PWY-5084] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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{{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}} | {{#set: common name=Oxoglutarate decarboxylase|2-oxoglutarate decarboxylation}} | ||
{{#set: gene associated=CHC_T00010287001_1|CHC_T00008312001|CHC_T00008441001|CHC_T00008441001_1|CHC_T00008312001_1}} | {{#set: gene associated=CHC_T00010287001_1|CHC_T00008312001|CHC_T00008441001|CHC_T00008441001_1|CHC_T00008312001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY66-398|PWY-5084}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 18:02, 9 January 2019
Contents
Reaction 2OXOGLUTDECARB-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- dihydrolipoamide dehydrogenase
- 2-oxoglutarate dehydrogenase, E1 component
- ec number:
- Synonym(s):
- Oxoglutarate decarboxylase
- 2-oxoglutarate decarboxylation
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 Oxo-glutarate-dehydrogenase-lipoyl[c] + 1 2-KETOGLUTARATE[c] => 1 Oxo-glutarate-dehydro-suc-DH-lipoyl[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] + 1 2-oxoglutarate[c] => 1 a [2-oxoglutarate dehydrogenase E2 protein] N6-S-succinyldihydrolipoyl-L-lysine[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00010287001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008312001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008441001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008441001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008312001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY66-398, TCA cycle III (animals): PWY66-398
- 11 reactions found over 11 reactions in the full pathway
- PWY-5084, 2-oxoglutarate decarboxylation to succinyl-CoA: PWY-5084
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
