Difference between revisions of "2OXOGLUTARATEDEH-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2OXOGLUTARATEDEH-RXN 2OXOGLUTARATEDEH-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2-oxo...") |
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** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | * [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] | ||
** '''9''' reactions found over '''10''' reactions in the full pathway | ** '''9''' reactions found over '''10''' reactions in the full pathway | ||
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | * [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690] | ||
** '''9''' reactions found over '''9''' reactions in the full pathway | ** '''9''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254] | ||
| + | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 60: | Line 60: | ||
{{#set: common name=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}} | {{#set: common name=2-oxoglutarate dehydrogenation|α-ketoglutarate oxidative decarboxylation}} | ||
{{#set: gene associated=CHC_T00008441001|CHC_T00008312001|CHC_T00008441001_1|CHC_T00010287001_1|CHC_T00008312001_1}} | {{#set: gene associated=CHC_T00008441001|CHC_T00008312001|CHC_T00008441001_1|CHC_T00010287001_1|CHC_T00008312001_1}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=TCA|PWY-5690|PWY-7254}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 18:06, 9 January 2019
Contents
Reaction 2OXOGLUTARATEDEH-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- 2-oxoglutarate dehydrogenase complex
- 2-oxoglutarate dehydrogenase, E1 component
- dihydrolipoamide dehydrogenase
- Synonym(s):
- 2-oxoglutarate dehydrogenation
- α-ketoglutarate oxidative decarboxylation
Reaction Formula
- With identifiers:
- 1 NAD[c] + 1 2-KETOGLUTARATE[c] + 1 CO-A[c] => 1 NADH[c] + 1 SUC-COA[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 NAD+[c] + 1 2-oxoglutarate[c] + 1 coenzyme A[c] => 1 NADH[c] + 1 succinyl-CoA[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008441001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008312001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008441001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010287001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008312001_1
- Source: orthology-galdieria.sulphuraria
Pathways
- TCA, TCA cycle I (prokaryotic): TCA
- 9 reactions found over 10 reactions in the full pathway
- PWY-5690, TCA cycle II (plants and fungi): PWY-5690
- 9 reactions found over 9 reactions in the full pathway
- PWY-7254, TCA cycle VII (acetate-producers): PWY-7254
- 7 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
