Difference between revisions of "TCA"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?obje...")
 
 
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA] ==
 +
* common name:
 +
** TCA cycle I (prokaryotic)
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
 
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
−
* common name:
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
−
** glyoxylate cycle
+
 
* Synonym(s):
 
* Synonym(s):
−
** glyoxylate bypass
+
** tricarboxylic acid cycle
−
** glyoxylate shunt
+
** citric acid cycle
 +
** Krebs cycle
 +
** Szent-Gyorgyi-Krebs cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
* '''4''' reaction(s) found
+
'''9''' reactions found over '''10''' reactions in the full pathway
−
** [[ACONITATEHYDR-RXN]]
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* [[2OXOGLUTARATEDEH-RXN]]
−
** [[MALATE-DEH-RXN]]
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** 5 associated gene(s):
−
** [[ACONITATEDEHYDR-RXN]]
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*** [[CHC_T00008441001]]
−
** [[CITSYN-RXN]]
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*** [[CHC_T00008312001]]
 +
*** [[CHC_T00008441001_1]]
 +
*** [[CHC_T00010287001_1]]
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*** [[CHC_T00008312001_1]]
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** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ACONITATEDEHYDR-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009087001_1]]
 +
*** [[CHC_T00008781001_1]]
 +
*** [[CHC_T00008781001]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009087001_1]]
 +
*** [[CHC_T00008781001]]
 +
*** [[CHC_T00008781001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[CITSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00007817001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00008951001_1]]
 +
*** [[CHC_T00008951001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[ISOCITDEH-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00009580001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[MALATE-DEH-RXN]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00009292001_1]]
 +
*** [[CHC_T00008733001_1]]
 +
*** [[CHC_T00008600001_1]]
 +
*** [[CHC_T00008733001]]
 +
*** [[CHC_T00009350001_1]]
 +
*** [[CHC_T00009173001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[RXN-14971]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00006990001_1]]
 +
*** [[CHC_T00008943001]]
 +
*** [[CHC_T00001817001_1]]
 +
*** [[CHC_T00008943001_1]]
 +
*** [[CHC_T00007584001_1]]
 +
*** [[CHC_T00007286001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
* [[SUCCCOASYN-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00009212001_1]]
 +
*** [[CHC_T00008602001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* '''2''' reaction(s) not found
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALATE-DEHYDROGENASE-ACCEPTOR-RXN MALATE-DEHYDROGENASE-ACCEPTOR-RXN]
−
** [http://metacyc.org/META/NEW-IMAGE?object=MALSYN-RXN MALSYN-RXN]
+
−
** [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN]
+
 
== External links  ==
 
== External links  ==
 
* ECOCYC:
 
* ECOCYC:
−
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=TCA TCA]
−
* METACYC:
+
* ARACYC:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
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** [http://metacyc.org/ARA/NEW-IMAGE?object=TCA TCA]
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: common name=TCA cycle I (prokaryotic)}}
−
{{#set: taxonomic range=TAX-2759}}
+
 
{{#set: taxonomic range=TAX-2}}
 
{{#set: taxonomic range=TAX-2}}
−
{{#set: common name=glyoxylate cycle}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: common name=glyoxylate bypass|glyoxylate shunt}}
+
{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Krebs cycle|Szent-Gyorgyi-Krebs cycle}}
−
{{#set: reaction found=4}}
+
{{#set: reaction found=9}}
−
{{#set: reaction not found=2}}
+
{{#set: total reaction=10}}
 +
{{#set: completion rate=90.0}}

Latest revision as of 15:25, 9 January 2019

Pathway TCA

  • common name:
    • TCA cycle I (prokaryotic)
  • taxonomic range:
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Krebs cycle
    • Szent-Gyorgyi-Krebs cycle

Reaction(s) found

9 reactions found over 10 reactions in the full pathway

Reaction(s) not found

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=TCA&oldid=20282"