Difference between revisions of "RXN0-1132"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1132 RXN0-1132] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate dehydrogenase E1 a...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYTIDEAM2-RXN CYTIDEAM2-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1132 RXN0-1132] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
 +
** dihydrolipoamide dehydrogenase
 +
** lipoamide dehydrogenase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/3.5.4.5 EC-3.5.4.5]
+
** [http://enzyme.expasy.org/EC/1.8.1.4 EC-1.8.1.4]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CYTIDINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[URIDINE]][c]
+
** 1 [[NAD]][c] '''+''' 1 [[Pyruvate-dehydrogenase-dihydrolipoate]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''+''' 1 [[NADH]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 cytidine[c] '''+''' 1 H2O[c] '''+''' 1 H+[c] '''=>''' 1 ammonium[c] '''+''' 1 uridine[c]
+
** 1 NAD+[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-dihydrolipoyl-L-lysine[c] '''=>''' 1 H+[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''+''' 1 NADH[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00000921001_1]]
+
* Gene: [[CHC_T00008441001]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[annotation-original_genome]]
−
** [[pantograph]]-[[a.taliana]]
+
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008441001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00010287001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008732001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00010287001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7193]], pyrimidine ribonucleosides salvage I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7193 PWY-7193]
+
* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY0-1295]], pyrimidine ribonucleosides degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1295 PWY0-1295]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-6556]], pyrimidine ribonucleosides salvage II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6556 PWY-6556]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16069 16069]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R01878 R01878]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P47718 P47718]
 
−
** [http://www.uniprot.org/uniprot/P0ABF6 P0ABF6]
 
−
** [http://www.uniprot.org/uniprot/P47298 P47298]
 
−
** [http://www.uniprot.org/uniprot/Q9CFM8 Q9CFM8]
 
−
** [http://www.uniprot.org/uniprot/P32320 P32320]
 
−
** [http://www.uniprot.org/uniprot/P75051 P75051]
 
−
** [http://www.uniprot.org/uniprot/Q9SU87 Q9SU87]
 
−
** [http://www.uniprot.org/uniprot/Q9SU86 Q9SU86]
 
−
** [http://www.uniprot.org/uniprot/O65571 O65571]
 
−
** [http://www.uniprot.org/uniprot/Q9S847 Q9S847]
 
−
** [http://www.uniprot.org/uniprot/Q9S7L8 Q9S7L8]
 
−
** [http://www.uniprot.org/uniprot/Q9S7S2 Q9S7S2]
 
−
** [http://www.uniprot.org/uniprot/O65896 O65896]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-3.5.4.5}}
+
{{#set: common name=pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor}}
−
{{#set: gene associated=CHC_T00000921001_1}}
+
{{#set: common name=dihydrolipoamide dehydrogenase}}
−
{{#set: in pathway=PWY-7193|PWY0-1295|PWY-6556}}
+
{{#set: common name=lipoamide dehydrogenase}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: ec number=EC-1.8.1.4}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: gene associated=CHC_T00008441001|CHC_T00008441001_1|CHC_T00010287001_1|CHC_T00008732001|CHC_T00010287001}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
+
{{#set: in pathway=PYRUVDEHYD-PWY}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:26, 23 May 2018

Reaction RXN0-1132

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
    • dihydrolipoamide dehydrogenase
    • lipoamide dehydrogenase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN0-1132&oldid=14308"