Difference between revisions of "PWY66-398"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinyl-pal...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.1.64-RXN 3.1.1.64-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 
* common name:
 
* common name:
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** all-trans-retinyl-palmitate hydrolase
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** TCA cycle III (animals)
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** Carboxylesterase
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* ec number:
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** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
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* Synonym(s):
 
* Synonym(s):
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** tricarboxylic acid cycle
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** citric acid cycle
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** Szent-Gyorgyi-Krebs cycle
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** Krebs cycle
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''11''' reactions found over '''11''' reactions in the full pathway
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** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-13524]][c] '''+''' 1 [[PALMITATE]][c]
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* [[2OXOGLUTDECARB-RXN]]
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* With common name(s):
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** 5 associated gene(s):
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** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 H+[c] '''+''' 1 all-trans-retinol[c] '''+''' 1 palmitate[c]
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*** [[CHC_T00010287001_1]]
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*** [[CHC_T00008312001]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008441001]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00008441001_1]]
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* [[CHC_T00008784001]]
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*** [[CHC_T00008312001_1]]
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** ORIGINAL_GENOME
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** 3 reconstruction source(s) associated:
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***AUTOMATED-NAME-MATCH
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*** [[annotation-original_genome]]
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== Pathways  ==
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*** [[orthology-ectocarpus_siliculosus]]
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== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[annotation]]:
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* [[ACONITATEDEHYDR-RXN]]
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** [[pathwaytools]]:
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** 3 associated gene(s):
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*** [[original_genome]]
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*** [[CHC_T00009087001_1]]
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*** [[CHC_T00008781001_1]]
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*** [[CHC_T00008781001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[ACONITATEHYDR-RXN]]
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** 3 associated gene(s):
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*** [[CHC_T00009087001_1]]
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*** [[CHC_T00008781001]]
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*** [[CHC_T00008781001_1]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[CITSYN-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00007817001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-galdieria.sulphuraria]]
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* [[FUMHYDR-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00008951001_1]]
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*** [[CHC_T00008951001]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[ISOCITRATE-DEHYDROGENASE-NAD+-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00008852001_1]]
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*** [[CHC_T00008852001]]
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*** [[CHC_T00009162001_1]]
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*** [[CHC_T00009293001]]
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*** [[CHC_T00009293001_1]]
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*** [[CHC_T00009162001]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[MALATE-DEH-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00008733001]]
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*** [[CHC_T00009350001_1]]
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*** [[CHC_T00009173001_1]]
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*** [[CHC_T00009292001_1]]
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*** [[CHC_T00008733001_1]]
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*** [[CHC_T00008600001_1]]
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** 4 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN0-1147]]
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** 6 associated gene(s):
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*** [[CHC_T00010287001_1]]
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*** [[CHC_T00010023001_1]]
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*** [[CHC_T00008312001_1]]
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*** [[CHC_T00008312001]]
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*** [[CHC_T00008441001_1]]
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*** [[CHC_T00008441001]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[SUCCCOASYN-RXN]]
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** 2 associated gene(s):
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*** [[CHC_T00009212001_1]]
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*** [[CHC_T00008602001_1]]
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** 3 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
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** 1 associated gene(s):
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*** [[CHC_T00009212001_1]]
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** 1 reconstruction source(s) associated:
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*** [[orthology-ectocarpus_siliculosus]]
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* [[SUCCINATE-DEHYDROGENASE-UBIQUINONE-RXN]]
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** 6 associated gene(s):
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*** [[CHC_T00007584001_1]]
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*** [[CHC_T00008943001_1]]
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*** [[CHC_T00007286001_1]]
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*** [[CHC_T00008943001]]
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*** [[CHC_T00006990001_1]]
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*** [[CHC_T00001817001_1]]
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** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-33208}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13933 13933]
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{{#set: common name=TCA cycle III (animals)}}
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* LIGAND-RXN:
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{{#set: common name=tricarboxylic acid cycle|citric acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02368 R02368]
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{{#set: reaction found=11}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=11}}
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{{#set: common name=all-trans-retinyl-palmitate hydrolase}}
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{{#set: completion rate=100.0}}
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{{#set: common name=Carboxylesterase}}
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{{#set: ec number=EC-3.1.1.1}}
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{{#set: gene associated=CHC_T00008784001}}
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{{#set: in pathway=}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 16:11, 23 May 2018

Pathway PWY66-398

  • taxonomic range:
  • common name:
    • TCA cycle III (animals)
  • Synonym(s):
    • tricarboxylic acid cycle
    • citric acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

11 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY66-398&oldid=16426"