Difference between revisions of "PWY0-1466"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name:...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PROLINE--TRNA-LIGASE-RXN PROLINE--TRNA-LIGASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
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** Anticodon-binding
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** isoprene biosynthesis II (engineered)
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** Proline--tRNA ligase, central part
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.15 EC-6.1.1.15]
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* Synonym(s):
 
* Synonym(s):
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** isoprenoid pathway
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** MVA pathway
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''7''' reactions found over '''8''' reactions in the full pathway
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** 1 [[PRO-tRNAs]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[PRO]][c] '''=>''' 1 [[Charged-PRO-tRNAs]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
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* [[1.1.1.34-RXN]]
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* With common name(s):
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** 4 associated gene(s):
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** 1 a tRNApro[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''+''' 1 L-proline[c] '''=>''' 1 an L-prolyl-[tRNApro][c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
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*** [[Ec-03_000570]]
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*** [[Ec-03_000580]]
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== Genes associated with this reaction  ==
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*** [[Ec-08_002990]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[Ec-27_005710]]
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* [[Ec-08_005570]]
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** 2 reconstruction source(s) associated:
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** ESILICULOSUS_GENOME
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*** [[annotation-esiliculosus_genome]]
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***EC-NUMBER
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*** [[orthology-aragem]]
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* [[Ec-26_002190]]
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* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
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** ESILICULOSUS_GENOME
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** 3 associated gene(s):
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***EC-NUMBER
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*** [[Ec-26_003940]]
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== Pathways  ==
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*** [[Ec-24_000870]]
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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*** [[Ec-22_002850]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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** 2 reconstruction source(s) associated:
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== Reconstruction information  ==
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*** [[annotation-esiliculosus_genome]]
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* Category: [[annotation]]
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*** [[orthology-aragem]]
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** Source: [[annotation-esiliculosus_genome]]
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* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
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*** Tool: [[pathwaytools]]
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** 1 associated gene(s):
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*** [[Ec-21_001440]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
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** 2 associated gene(s):
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*** [[Ec-19_002030]]
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*** [[Ec-21_004360]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[IPPISOM-RXN]]
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** 2 associated gene(s):
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*** [[Ec-11_001030]]
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*** [[Ec-18_002690]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[MEVALONATE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-26_004370]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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* [[PHOSPHOMEVALONATE-KINASE-RXN]]
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** 1 associated gene(s):
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*** [[Ec-25_002910]]
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** 2 reconstruction source(s) associated:
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*** [[annotation-esiliculosus_genome]]
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*** [[orthology-aragem]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.27-RXN 4.2.3.27-RXN]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-2157}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14305 14305]
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{{#set: taxonomic range=TAX-33208}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03661 R03661]
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{{#set: taxonomic range=TAX-2}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-33090}}
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** [http://www.uniprot.org/uniprot/O51363 O51363]
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{{#set: common name=isoprene biosynthesis II (engineered)}}
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** [http://www.uniprot.org/uniprot/O58734 O58734]
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{{#set: common name=isoprenoid pathway|MVA pathway}}
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** [http://www.uniprot.org/uniprot/Q9ZMJ6 Q9ZMJ6]
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{{#set: reaction found=7}}
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** [http://www.uniprot.org/uniprot/P43830 P43830]
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/P47525 P47525]
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{{#set: completion rate=88.0}}
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** [http://www.uniprot.org/uniprot/O26708 O26708]
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** [http://www.uniprot.org/uniprot/Q9JU09 Q9JU09]
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** [http://www.uniprot.org/uniprot/Q58635 Q58635]
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** [http://www.uniprot.org/uniprot/P56124 P56124]
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** [http://www.uniprot.org/uniprot/O83195 O83195]
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** [http://www.uniprot.org/uniprot/Q9Z851 Q9Z851]
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** [http://www.uniprot.org/uniprot/O31755 O31755]
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** [http://www.uniprot.org/uniprot/P36431 P36431]
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** [http://www.uniprot.org/uniprot/Q9ZDE7 Q9ZDE7]
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** [http://www.uniprot.org/uniprot/Q9PHX1 Q9PHX1]
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** [http://www.uniprot.org/uniprot/Q9CDT4 Q9CDT4]
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** [http://www.uniprot.org/uniprot/Q9WYY4 Q9WYY4]
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** [http://www.uniprot.org/uniprot/P75382 P75382]
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** [http://www.uniprot.org/uniprot/Q49090 Q49090]
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** [http://www.uniprot.org/uniprot/P07814 P07814]
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** [http://www.uniprot.org/uniprot/P16659 P16659]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Anticodon-binding}}
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{{#set: common name=Proline--tRNA ligase, central part}}
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{{#set: ec number=EC-6.1.1.15}}
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{{#set: gene associated=Ec-08_005570|Ec-26_002190}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction source=annotation-esiliculosus_genome}}
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{{#set: reconstruction tool=pathwaytools}}
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Revision as of 14:36, 21 March 2018

Pathway PWY-7391

Reaction(s) found

7 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY0-1466&oldid=20014"