Difference between revisions of "PWY-7391"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-12 RXN66-12] == * direction: ** LEFT-TO-RIGHT * common name: ** 4,4-dimethyl-14α-hydrox...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-21...")
 
(One intermediate revision by the same user not shown)
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-12 RXN66-12] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7391 PWY-7391] ==
−
* direction:
+
* taxonomic range:
−
** LEFT-TO-RIGHT
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33208 TAX-33208]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 
* common name:
 
* common name:
−
** 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydrogenase
+
** isoprene biosynthesis II (engineered)
−
** Cytochrome P450
+
 
* Synonym(s):
 
* Synonym(s):
 +
** isoprenoid pathway
 +
** MVA pathway
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
'''7''' reactions found over '''8''' reactions in the full pathway
−
** 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[CPD-8607]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[CPD-8608]][c] '''+''' 1 [[NADP]][c]
+
* [[1.1.1.34-RXN]]
−
* With common name(s):
+
** 4 associated gene(s):
−
** 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol[c] '''+''' 1 oxygen[c] '''=>''' 2 H2O[c] '''+''' 1 4,4-dimethyl-14α-formyl-5α-cholesta-8-en-3β-ol[c] '''+''' 1 NADP+[c]
+
*** [[Ec-03_000570]]
−
 
+
*** [[Ec-03_000580]]
−
== Genes associated with this reaction  ==
+
*** [[Ec-08_002990]]
−
Genes have been associated with this reaction based on different elements listed below.
+
*** [[Ec-27_005710]]
−
* [[Ec-10_006240]]
+
** 2 reconstruction source(s) associated:
−
** ESILICULOSUS_GENOME
+
*** [[annotation-esiliculosus_genome]]
−
***EC-NUMBER
+
*** [[orthology-aragem]]
−
== Pathways  ==
+
* [[ACETYL-COA-ACETYLTRANSFER-RXN]]
−
* [[PWY66-3]], cholesterol biosynthesis II (via 24,25-dihydrolanosterol): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-3 PWY66-3]
+
** 3 associated gene(s):
−
** '''9''' reactions found over '''22''' reactions in the full pathway
+
*** [[Ec-26_003940]]
−
== Reconstruction information  ==
+
*** [[Ec-24_000870]]
−
* Category: [[annotation]]
+
*** [[Ec-22_002850]]
−
** Source: [[annotation-esiliculosus_genome]]
+
** 2 reconstruction source(s) associated:
−
*** Tool: [[pathwaytools]]
+
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[DIPHOSPHOMEVALONTE-DECARBOXYLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-21_001440]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-19_002030]]
 +
*** [[Ec-21_004360]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[IPPISOM-RXN]]
 +
** 2 associated gene(s):
 +
*** [[Ec-11_001030]]
 +
*** [[Ec-18_002690]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[MEVALONATE-KINASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-26_004370]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
* [[PHOSPHOMEVALONATE-KINASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Ec-25_002910]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-esiliculosus_genome]]
 +
*** [[orthology-aragem]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=4.2.3.27-RXN 4.2.3.27-RXN]
 
== External links  ==
 
== External links  ==
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: taxonomic range=TAX-2157}}
−
{{#set: common name=4,4-dimethyl-14α-hydroxymethyl-5α-cholesta-8-en-3β-ol 14-dehydrogenase}}
+
{{#set: taxonomic range=TAX-33208}}
−
{{#set: common name=Cytochrome P450}}
+
{{#set: taxonomic range=TAX-4751}}
−
{{#set: gene associated=Ec-10_006240}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: in pathway=PWY66-3}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=isoprene biosynthesis II (engineered)}}
−
{{#set: reconstruction source=annotation-esiliculosus_genome}}
+
{{#set: common name=isoprenoid pathway|MVA pathway}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reaction found=7}}
 +
{{#set: total reaction=8}}
 +
{{#set: completion rate=88.0}}

Latest revision as of 20:33, 21 March 2018

Pathway PWY-7391

Reaction(s) found

7 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ectogem/index.php?title=PWY-7391&oldid=27749"