Gap-filling
From metabolic_network
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Ec number
Reconstruction category
Reconstruction tool
Reconstruction source
Gene associated
In pathway
1.5.1.20-RXN-5-METHYL-THF.NAD..METHYLENE-THF.NADH.PROTON.44.
Gap-filling
Meneco
Added for gapfilling
2.3.1.179-RXN
EC-2.3.1.179
Gap-filling
Meneco
Added for gapfilling
PWY-5973
2.5.1.19-RXN
EC-2.5.1.19
Gap-filling
Meneco
Added for gapfilling
PWY-6163
2.7.8.24-RXN
EC-2.7.8.24
Gap-filling
Meneco
Added for gapfilling
PWY-6826
3-PHOSPHOGLYCERATE-PHOSPHATASE-RXN
EC-3.1.3.38
Gap-filling
Meneco
Added for gapfilling
3.1.4.14-RXN
EC-3.1.4.14
Gap-filling
Meneco
Added for gapfilling
PWY-6012
5.3.3.14-RXN
EC-5.3.3.14
Gap-filling
Meneco
Added for gapfilling
PWY0-862
ADENYLYLSULFATE-REDUCTASE-RXN
EC-1.8.99.2
Gap-filling
Meneco
Added for gapfilling
DISSULFRED-PWY
PWY-5279
PWY-5278
P224-PWY
ANTHRANSYN-RXN
EC-4.1.3.27
Gap-filling
Meneco
Added for gapfilling
TRPSYN-PWY
PWY-5958
PWY-6661
PWY-6660
CYSPH-RXN
EC-2.5.1
Gap-filling
Meneco
Added for gapfilling
PWY-702
CYSTATHIONASE-RXN
Gap-filling
Meneco
Added for gapfilling
DIHYDROFOLATEREDUCT-RXN-THF.NADP..DIHYDROFOLATE.NADPH.PROTON.37.
Gap-filling
Meneco
Added for gapfilling
FESO3OXI-RXN
Gap-filling
Meneco
Added for gapfilling
FESULFOX-PWY
GCVMULTI-RXN-GLY.THF.NAD..METHYLENE-THF.AMMONIUM.CARBON-DIOXIDE.NADH.56.
Gap-filling
Meneco
Added for gapfilling
GLYOHMETRANS-RXN-SER.THF..GLY.METHYLENE-THF.WATER.33.
Gap-filling
Meneco
Added for gapfilling
H2NEOPTERINALDOL-RXN
EC-4.1.2.25
Gap-filling
Meneco
Added for gapfilling
PWY-7539
PWY-6148
PWY-6797
PWY-6147
HISTIDPHOS-RXN
EC-3.1.3.15
Gap-filling
Meneco
Added for gapfilling
HISTSYN-PWY
HOMOCYSMETB12-RXN-HOMO-CYS.5-METHYL-THF..MET.THF.31.
Gap-filling
Meneco
Added for gapfilling
HOMSUCTRAN-RXN
EC-2.3.1.46
Gap-filling
Meneco
Added for gapfilling
HOMOSER-METSYN-PWY
LINOLEOYL-RXN
EC-3.1.2
Gap-filling
Meneco
Added for gapfilling
PWY-6917
PHOSPHOGLYCERATE-PHOSPHATASE-RXN
EC-3.1.3.20
Gap-filling
Meneco
Added for gapfilling
RXN-10662
EC-3.1.2
Gap-filling
Meneco
Added for gapfilling
RXN-10727
Myristoyl-ACP hydrolase activity
Tetradecanoyl-ACP hydrolase activity
EC-3.1.2.14
Gap-filling
Meneco
Added for gapfilling
RXN-13295
EC-2.3.1.199
Gap-filling
Meneco
Added for gapfilling
PWY-7036
RXN-13299
EC-1.1.1.330
Gap-filling
Meneco
Added for gapfilling
PWY-7036
RXN-13303
EC-4.2.1.134
Gap-filling
Meneco
Added for gapfilling
PWY-7036
RXN-13307
EC-1.3.1.93
Gap-filling
Meneco
Added for gapfilling
PWY-7036
RXN-13406
EC-2.1.1.162
Gap-filling
Meneco
Added for gapfilling
RXN-13431
EC-2.3.1
Gap-filling
Meneco
Added for gapfilling
PWY-7050
RXN-13435
EC-3.1.2.2
Gap-filling
Meneco
Added for gapfilling
RXN-14014
EC-1.17.1.8
Gap-filling
Meneco
Added for gapfilling
PWY-5097
PWY-2942
DAPLYSINESYN-PWY
PWY-2941
RXN-16016
EC-2.3.1
Gap-filling
Meneco
Added for gapfilling
PWY-7583
RXN-16094
EC-2.3.1.199
Gap-filling
Meneco
Added for gapfilling
PWY-7601
PWY-7725
PWY-6598
RXN-16095
EC-1.1.1.330
Gap-filling
Meneco
Added for gapfilling
PWY-7601
PWY-7725
PWY-6598
RXN-16096
EC-4.2.1.134
Gap-filling
Meneco
Added for gapfilling
PWY-7601
PWY-7725
PWY-6598
RXN-16097
EC-1.3.1.93
Gap-filling
Meneco
Added for gapfilling
PWY-7601
PWY-7725
PWY-6598
RXN-17105
EC-1.14.19
Gap-filling
Meneco
Added for gapfilling
PWY-7725
RXN-701
EC-1.8.1
Gap-filling
Meneco
Added for gapfilling
RXN-9548
EC-3.1.2.14
Gap-filling
Meneco
Added for gapfilling
PWY-5989
RXN-9549
EC-3.1.2.14
Gap-filling
Meneco
Added for gapfilling
PWY-7746
PWY-5971
PWY-5994
RXN-9550
EC-3.1.2.14
Gap-filling
Meneco
Added for gapfilling
PWY-5366
PWY-6282
RXN-9555
EC-3.1.2.14
Gap-filling
Meneco
Added for gapfilling
PWY-5973
RXN-9601
EC-1.14.19.6
Gap-filling
Meneco
Added for gapfilling
PWY-6001
RXN-9629
EC-3.1.2.2
Gap-filling
Meneco
Added for gapfilling
RXN3O-5304
EC-2.3.1
EC-2.3.1.86
Gap-filling
Meneco
Added for gapfilling
PWY3O-355
RXN3O-9780
EC-2.3.1
Gap-filling
Meneco
Added for gapfilling
PWY-7746
PWY-5994
THRESYN-RXN
EC-4.2.3.1
Gap-filling
Meneco
Added for gapfilling
HOMOSER-THRESYN-PWY
TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10279.NAD..CPD-14281.NADH.PROTON.37.
Gap-filling
Meneco
Added for gapfilling
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Metabolic network components
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a.thaliana.aragem
added for gapfilling
added to manage seeds from boundary to extracellular compartment
added to manage seeds from extracellular to cytosol compartment
exchange biomass to boundary
forfba
genome
reaction from kegg for the production of cpd-12653 (stearidonate)
reaction from kegg for the production of cpd-8117 (gamma-linolenate)
reaction from kegg for the production of docosanoate
reaction from kegg for the production of eicosadienoates
reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
reaction from plantcyc20.5
transport biomass to external compartment
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