Manual
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Common name
Ec number
Reconstruction category
Reconstruction tool
Reconstruction source
Gene associated
In pathway
Biomass rxn
Manual
Forfba
None
Exchange BIOMASS
Manual
Exchange biomass to boundary
ExchangeSeed ACP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ADENOSYLCOBALAMIN
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ADP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMMONIA
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed AMP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ATP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Acceptor
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed BIOTIN
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CA+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CARBON-DIOXIDE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CL-
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CO+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed COB-I-ALAMIN
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-3
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CPD-315
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed CU+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Donor-H2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed EDTA
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FE+3
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FERRICYTOCHROME-B5
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed FERROCYTOCHROME-B5
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed GDP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed GTP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed HYDROGEN-PEROXIDE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed K+
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Light
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MG+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed MN+2
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NA+
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NAD
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NAD-P-OR-NOP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NADH
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NADH-P-OR-NOP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NADP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NADPH
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed NITRATE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed OXYGEN-MOLECULE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed PPI
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed PROTON
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed Pi
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed SULFATE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed THIAMINE
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed UDP
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed WATER
Manual
Added to manage seeds from boundary to extracellular compartment
ExchangeSeed ZN+2
Manual
Added to manage seeds from boundary to extracellular compartment
R07063
Manual
Reaction from kegg for the production of cpd-8117 (gamma-linolenate)
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manual
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a.thaliana.aragem
added for gapfilling
added to manage seeds from boundary to extracellular compartment
added to manage seeds from extracellular to cytosol compartment
exchange biomass to boundary
forfba
genome
reaction from kegg for the production of cpd-12653 (stearidonate)
reaction from kegg for the production of cpd-8117 (gamma-linolenate)
reaction from kegg for the production of docosanoate
reaction from kegg for the production of eicosadienoates
reaction from metacyc 18.5 to produce linolenic_acid. reaction phospholipase-a2-rxn deleted in return because implies linolenic_acid compound class only
reaction from plantcyc20.5
transport biomass to external compartment
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