Difference between revisions of "Tiso gene 135"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-5...")
(Created page with "Category:Gene == Gene Tiso_gene_135 == * right end position: ** 37505 * transcription direction: ** POSITIVE * left end position: ** 36442 * centisome position: ** 89.6041...")
 
(One intermediate revision by the same user not shown)
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[[Category:Pathway]]
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[[Category:Gene]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5152 PWY-5152] ==
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== Gene Tiso_gene_135 ==
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* taxonomic range:
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* right end position:
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-58024 TAX-58024]
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** 37505
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* common name:
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* transcription direction:
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** leucodelphinidin biosynthesis
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** POSITIVE
 +
* left end position:
 +
** 36442
 +
* centisome position:
 +
** 89.60413   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) found ==
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== Reactions associated ==
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'''2''' reactions found over '''5''' reactions in the full pathway
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* Reaction: [[2.3.1.165-RXN]]
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* [[RXN-7784]]
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** Source: [[annotation-in-silico_annotation]]
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** 4 associated gene(s):
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*** Assignment: ec-number
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*** [[Tiso_gene_9504]]
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* Reaction: [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
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*** [[Tiso_gene_11016]]
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** Source: [[annotation-in-silico_annotation]]
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*** [[Tiso_gene_15272]]
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*** Assignment: ec-number
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*** [[Tiso_gene_9503]]
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* Reaction: [[3-OXOACYL-ACP-REDUCT-RXN]]
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** 3 reconstruction source(s) associated:
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** Source: [[annotation-in-silico_annotation]]
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*** [[orthology-athaliana]]
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*** Assignment: ec-number
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*** [[annotation-in-silico_annotation]]
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* Reaction: [[3-OXOACYL-ACP-SYNTH-BASE-RXN]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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* [[RXN-7922]]
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*** Assignment: ec-number
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** 1 associated gene(s):
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* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
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*** [[Tiso_gene_3330]]
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** Source: [[annotation-in-silico_annotation]]
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** 2 reconstruction source(s) associated:
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*** Assignment: ec-number
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*** [[orthology-athaliana]]
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* Reaction: [[4.2.1.58-RXN]]
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*** [[orthology-esiliculosus]]
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** Source: [[annotation-in-silico_annotation]]
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== Reaction(s) not found ==
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*** Assignment: ec-number
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-13718 RXN-13718]
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* Reaction: [[4.2.1.59-RXN]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-525 RXN-525]
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** Source: [[annotation-in-silico_annotation]]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7921 RXN-7921]
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*** Assignment: ec-number
 +
* Reaction: [[4.2.1.61-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[ACP-S-ACETYLTRANSFER-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[ACYLCOASYN-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[ENOYL-ACP-REDUCT-NADPH-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[FATTY-ACYL-COA-SYNTHASE-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[LINOLENOYL-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[MALONYL-COA-ACP-TRANSACYL-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[R223-RXN]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-12184]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-12560]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-12978]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-13008]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-13279]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-13290]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-13614]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-16380]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16389]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16393]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16401]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16402]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16415]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-16418]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-5901]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-7904]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9514]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9515]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
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* Reaction: [[RXN-9518]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9520]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9521]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9524]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9526]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9528]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9530]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9532]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9533]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9534]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9535]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9536]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9537]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9538]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9540]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9542]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9623]]
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** Source: [[annotation-in-silico_annotation]]
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*** Assignment: ec-number
 +
* Reaction: [[RXN-9633]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9634]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9644]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9648]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9650]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9651]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9652]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9653]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9654]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9655]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN-9673]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN0-7238]]
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** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN0-7239]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN0-7248]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN3O-1803]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN3O-5293]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN3O-5304]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-469]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-477]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-480]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-483]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[RXN66-484]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
* Reaction: [[TRANS-RXN0-623]]
 +
** Source: [[annotation-in-silico_annotation]]
 +
*** Assignment: ec-number
 +
== Pathways associated ==
 +
* [[PWY-6920]]
 +
* [[PWY-7664]]
 +
* [[P221-PWY]]
 +
* [[PWY-7388]]
 +
* [[PWY-321]]
 +
* [[PWY-5972]]
 +
* [[PWY-5970]]
 +
* [[PWY-5971]]
 +
* [[PWY-7033]]
 +
* [[PWY-5676]]
 +
* [[PWY-5136]]
 +
* [[PWY66-389]]
 +
* [[PWY-7288]]
 +
* [[PWY-4381]]
 +
* [[PWY-7490]]
 +
* [[PWY-6733]]
 +
* [[PWY-7094]]
 +
* [[PWY66-391]]
 +
* [[PWY0-862]]
 +
* [[PWY-5994]]
 +
* [[PWY3O-355]]
 +
* [[FAO-PWY]]
 +
* [[PWY-1121]]
 +
* [[PWY-6873]]
 +
* [[PWY-5965]]
 +
* [[PWY-5966]]
 +
* [[PWY-5143]]
 +
* [[FASYN-INITIAL-PWY]]
 +
* [[PWY-5885]]
 +
* [[PWY-7724]]
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* [[PWY-5741]]
 +
* [[FASYN-ELONG-PWY]]
 +
* [[PWY-6001]]
 +
* [[PWY-7216]]
 +
* [[PWY-5147]]
 +
* [[PWY-7049]]
 +
* [[PWY-6799]]
 +
* [[PWY-6000]]
 +
* [[PWY66-387]]
 +
* [[PWY-5989]]
 +
* [[PWY1-3]]
 +
* [[PWY-6803]]
 +
* [[PWY66-388]]
 
== External links  ==
 
== External links  ==
−
* ARACYC:
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{{#set: right end position=37505}}
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** [http://metacyc.org/ARA/NEW-IMAGE?object=PWY-5152 PWY-5152]
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{{#set: transcription direction=POSITIVE}}
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{{#set: taxonomic range=TAX-58024}}
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{{#set: left end position=36442}}
−
{{#set: common name=leucodelphinidin biosynthesis}}
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{{#set: centisome position=89.60413    }}
−
{{#set: reaction found=2}}
+
{{#set: reaction associated=2.3.1.165-RXN|3-HYDROXYDECANOYL-ACP-DEHYDR-RXN|3-OXOACYL-ACP-REDUCT-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|4.2.1.58-RXN|4.2.1.59-RXN|4.2.1.61-RXN|ACP-S-ACETYLTRANSFER-RXN|ACYLCOASYN-RXN|ENOYL-ACP-REDUCT-NADPH-RXN|FATTY-ACYL-COA-SYNTHASE-RXN|LINOLENOYL-RXN|MALONYL-COA-ACP-TRANSACYL-RXN|PROTEIN-TYROSINE-SULFOTRANSFERASE-RXN|R223-RXN|RXN-12184|RXN-12560|RXN-12978|RXN-13008|RXN-13279|RXN-13290|RXN-13614|RXN-16380|RXN-16389|RXN-16393|RXN-16401|RXN-16402|RXN-16415|RXN-16418|RXN-5901|RXN-7904|RXN-9514|RXN-9515|RXN-9518|RXN-9520|RXN-9521|RXN-9524|RXN-9526|RXN-9528|RXN-9530|RXN-9532|RXN-9533|RXN-9534|RXN-9535|RXN-9536|RXN-9537|RXN-9538|RXN-9540|RXN-9542|RXN-9623|RXN-9633|RXN-9634|RXN-9644|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN-9655|RXN-9673|RXN0-7238|RXN0-7239|RXN0-7248|RXN3O-1803|RXN3O-5293|RXN3O-5304|RXN66-469|RXN66-477|RXN66-480|RXN66-483|RXN66-484|TRANS-RXN0-623}}
−
{{#set: total reaction=5}}
+
{{#set: pathway associated=PWY-6920|PWY-7664|P221-PWY|PWY-7388|PWY-321|PWY-5972|PWY-5970|PWY-5971|PWY-7033|PWY-5676|PWY-5136|PWY66-389|PWY-7288|PWY-4381|PWY-7490|PWY-6733|PWY-7094|PWY66-391|PWY0-862|PWY-5994|PWY3O-355|FAO-PWY|PWY-1121|PWY-6873|PWY-5965|PWY-5966|PWY-5143|FASYN-INITIAL-PWY|PWY-5885|PWY-7724|PWY-5741|FASYN-ELONG-PWY|PWY-6001|PWY-7216|PWY-5147|PWY-7049|PWY-6799|PWY-6000|PWY66-387|PWY-5989|PWY1-3|PWY-6803|PWY66-388}}
−
{{#set: completion rate=40.0}}
+

Latest revision as of 19:44, 21 March 2018

Gene Tiso_gene_135

  • right end position:
    • 37505
  • transcription direction:
    • POSITIVE
  • left end position:
    • 36442
  • centisome position:
    • 89.60413
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_135&oldid=43522"