Difference between revisions of "Tiso gene 15043"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-P3 DIHYDRONEOPTERIN-P3] == * smiles: ** C1(NC2(N=C(N)NC(=O)C(N=C1C(O)C(O)COP([...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-3...")
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−
[[Category:Metabolite]]
+
[[Category:Pathway]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=DIHYDRONEOPTERIN-P3 DIHYDRONEOPTERIN-P3] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994] ==
−
* smiles:
+
* taxonomic range:
−
** C1(NC2(N=C(N)NC(=O)C(N=C1C(O)C(O)COP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])=2))
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33154 TAX-33154]
−
* inchi key:
+
−
** InChIKey=DGGUVLXVLHAAGT-XINAWCOVSA-J
+
 
* common name:
 
* common name:
−
** 7,8-dihydroneopterin 3'-triphosphate
+
** palmitate biosynthesis I (animals and fungi)
−
* molecular weight:
+
−
** 491.141   
+
 
* Synonym(s):
 
* Synonym(s):
−
** 6-(L-erythro-1,2-dihydroxypropyl 3-triphosphate)-7,8-dihydropterin
+
** palmitic acid biosynthesis
−
** 6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin
+
** de novo lipogenesis
−
** 6-(D-erythro-1',2',3'-trihydroxypropyl)-7,8-dihydropterin-3'-triphosphate
+
−
** 7,8-dihydroneopterin 3'-triphosphate
+
−
** 2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate
+
−
** dihydroneopterin triphosphate
+
−
** H2NTP
+
−
** 7,8-dihydroneopterin triphosphate
+
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction(s) found ==
−
* [[H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN]]
+
'''31''' reactions found over '''31''' reactions in the full pathway
−
== Reaction(s) known to produce the compound ==
+
* [[3.1.2.21-RXN]]
−
* [[GTP-CYCLOHYDRO-I-RXN]]
+
** 0 associated gene:
−
== Reaction(s) of unknown directionality ==
+
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[4.2.1.58-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_6884]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_135]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[4.2.1.59-RXN]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_6884]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[4.2.1.61-RXN]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_6884]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_10876]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[PALMITOYL-COA-HYDROLASE-RXN]]
 +
** 1 associated gene(s):
 +
*** [[Tiso_gene_801]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-creinhardtii]]
 +
* [[RXN-9514]]
 +
** 10 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_16579]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_10415]]
 +
*** [[Tiso_gene_624]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9515]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9518]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13083]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9520]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_6884]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_136]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-9521]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9524]]
 +
** 10 associated gene(s):
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_624]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_10415]]
 +
*** [[Tiso_gene_16579]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_13394]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9526]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13394]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9528]]
 +
** 10 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_624]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_16579]]
 +
*** [[Tiso_gene_10415]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_9885]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9530]]
 +
** 5 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9532]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9533]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_6884]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN-9534]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_10778]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_13394]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[RXN-9536]]
 +
** 10 associated gene(s):
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_10415]]
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_624]]
 +
*** [[Tiso_gene_16579]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9537]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_6884]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_9421]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_6885]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_6671]]
 +
** 5 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[orthology-creinhardtii]]
 +
*** [[orthology-synechocystis]]
 +
*** [[annotation-in-silico_annotation]]
 +
* [[RXN-9538]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_10778]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[manual-primary_network]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[RXN-9540]]
 +
** 7 associated gene(s):
 +
*** [[Tiso_gene_9885]]
 +
*** [[Tiso_gene_13083]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9542]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_10778]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-synechocystis]]
 +
* [[RXN-9549]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
* [[RXN-9648]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_5939]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_136]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9650]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_5939]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9651]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_5939]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9652]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_5939]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9653]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_5939]]
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_136]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-experimental_annotation]]
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9654]]
 +
** 9 associated gene(s):
 +
*** [[Tiso_gene_15991]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_19302]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_14485]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_5939]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[annotation-experimental_annotation]]
 +
*** [[orthology-esiliculosus]]
 +
* [[RXN-9655]]
 +
** 6 associated gene(s):
 +
*** [[Tiso_gene_10876]]
 +
*** [[Tiso_gene_136]]
 +
*** [[Tiso_gene_500]]
 +
*** [[Tiso_gene_13394]]
 +
*** [[Tiso_gene_135]]
 +
*** [[Tiso_gene_6884]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-in-silico_annotation]]
 +
*** [[manual-primary_network]]
 +
*** [[annotation-experimental_annotation]]
 +
* [[RXN3O-9780]]
 +
** 0 associated gene:
 +
** 1 reconstruction source(s) associated:
 +
*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
 +
== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
−
* BIGG : ahdt
+
{{#set: taxonomic range=TAX-33154}}
−
* PUBCHEM:
+
{{#set: common name=palmitate biosynthesis I (animals and fungi)}}
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=25201779 25201779]
+
{{#set: common name=palmitic acid biosynthesis|de novo lipogenesis}}
−
* HMDB : HMDB00980
+
{{#set: reaction found=31}}
−
* LIGAND-CPD:
+
{{#set: total reaction=31}}
−
** [http://www.genome.jp/dbget-bin/www_bget?C04895 C04895]
+
{{#set: completion rate=100.0}}
−
* CHEBI:
+
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=58462 58462]
+
−
* METABOLIGHTS : MTBLC58462
+
−
{{#set: smiles=C1(NC2(N=C(N)NC(=O)C(N=C1C(O)C(O)COP([O-])(=O)OP([O-])(=O)OP([O-])(=O)[O-])=2))}}
+
−
{{#set: inchi key=InChIKey=DGGUVLXVLHAAGT-XINAWCOVSA-J}}
+
−
{{#set: common name=7,8-dihydroneopterin 3'-triphosphate}}
+
−
{{#set: molecular weight=491.141    }}
+
−
{{#set: common name=6-(L-erythro-1,2-dihydroxypropyl 3-triphosphate)-7,8-dihydropterin|6-[(1S,2R)-1,2-dihydroxy-3-triphosphooxypropyl]-7,8-dihydropterin|6-(D-erythro-1',2',3'-trihydroxypropyl)-7,8-dihydropterin-3'-triphosphate|7,8-dihydroneopterin 3'-triphosphate|2-amino-4-hydroxy-6-(erythro-1,2,3-trihydroxypropyl)dihydropteridine triphosphate|dihydroneopterin triphosphate|H2NTP|7,8-dihydroneopterin triphosphate}}
+
−
{{#set: consumed by=H2NEOPTERINP3PYROPHOSPHOHYDRO-RXN}}
+
−
{{#set: produced by=GTP-CYCLOHYDRO-I-RXN}}
+

Revision as of 14:49, 21 March 2018

Pathway PWY-5994

  • taxonomic range:
  • common name:
    • palmitate biosynthesis I (animals and fungi)
  • Synonym(s):
    • palmitic acid biosynthesis
    • de novo lipogenesis

Reaction(s) found

31 reactions found over 31 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=Tiso_gene_15043&oldid=30534"