Difference between revisions of "A-2-oxoglutarate-dehydrogenase-E2-protei"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2902 RXN-2902] == * direction: ** LEFT-TO-RIGHT * common name: ** methylmalonate-semialdehyde_d...")
(Created page with "Category:Gene == Gene Tiso_gene_6884 == * right end position: ** 9260 * transcription direction: ** POSITIVE * left end position: ** 7378 * centisome position: ** 62.93074...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2902 RXN-2902] ==
+
== Gene Tiso_gene_6884 ==
−
* direction:
+
* right end position:
−
** LEFT-TO-RIGHT
+
** 9260
−
* common name:
+
* transcription direction:
−
** methylmalonate-semialdehyde_dehydrogenase
+
** POSITIVE
−
* ec number:
+
* left end position:
−
** [http://enzyme.expasy.org/EC/1.2.1 EC-1.2.1]
+
** 7378
 +
* centisome position:
 +
** 62.93074   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[3-HYDROXYDECANOYL-ACP-DEHYDR-RXN]]
−
** 1 [[NAD]][c] '''+''' 1 [[MALONATE-S-ALD]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[NADH]][c]
+
** Source: [[annotation-experimental_annotation]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 NAD+[c] '''+''' 1 3-oxopropanoate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 CO2[c] '''+''' 1 NADH[c]
+
* Reaction: [[4.2.1.58-RXN]]
−
 
+
** Source: [[annotation-experimental_annotation]]
−
== Genes associated with this reaction  ==
+
*** Assignment: automated-name-match
−
Genes have been associated with this reaction based on different elements listed below.
+
* Reaction: [[4.2.1.59-RXN]]
−
* [[Tiso_gene_11323]]
+
** Source: [[annotation-experimental_annotation]]
−
** IN-SILICO_ANNOTATION
+
*** Assignment: automated-name-match
−
***AUTOMATED-NAME-MATCH
+
* Reaction: [[4.2.1.61-RXN]]
−
== Pathways  ==
+
** Source: [[annotation-experimental_annotation]]
−
* [[PWY-7574]], propanoyl-CoA degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7574 PWY-7574]
+
*** Assignment: automated-name-match
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
* Reaction: [[RXN-10061]]
−
* [[BETA-ALA-DEGRADATION-I-PWY]], β-alanine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=BETA-ALA-DEGRADATION-I-PWY BETA-ALA-DEGRADATION-I-PWY]
+
** Source: [[annotation-experimental_annotation]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
*** Assignment: automated-name-match
−
* [[P562-PWY]], myo-inositol degradation I: [http://metacyc.org/META/NEW-IMAGE?object=P562-PWY P562-PWY]
+
* Reaction: [[RXN-10656]]
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
** Source: [[annotation-experimental_annotation]]
−
* [[PWY-1781]], β-alanine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1781 PWY-1781]
+
*** Assignment: automated-name-match
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* Reaction: [[RXN-10660]]
−
== Reconstruction information  ==
+
** Source: [[annotation-experimental_annotation]]
−
* Category: [[annotation]]
+
*** Assignment: automated-name-match
−
** Source: [[annotation-in-silico_annotation]]
+
* Reaction: [[RXN-11477]]
−
*** Tool: [[pathwaytools]]
+
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-11481]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-16619]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-16623]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-16627]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-16631]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9520]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9533]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9537]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9557]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9634]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN-9655]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN0-2144]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN1G-1084]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN1G-220]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN1G-320]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN1G-363]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
* Reaction: [[RXN1G-517]]
 +
** Source: [[annotation-experimental_annotation]]
 +
*** Assignment: automated-name-match
 +
== Pathways associated ==
 +
* [[PWY-6113]]
 +
* [[FASYN-ELONG-PWY]]
 +
* [[PWY-6519]]
 +
* [[PWY-7388]]
 +
* [[PWY-7664]]
 +
* [[PWY-6282]]
 +
* [[PWY-5973]]
 +
* [[PWY-5989]]
 +
* [[PWY-5971]]
 +
* [[PWYG-321]]
 +
* [[PWY-7663]]
 +
* [[PWY-5994]]
 +
* [[PWY3O-355]]
 +
* [[PWY0-862]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: right end position=9260}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22992 22992]
+
{{#set: transcription direction=POSITIVE}}
−
* LIGAND-RXN:
+
{{#set: left end position=7378}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R00705 R00705]
+
{{#set: centisome position=62.93074    }}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: reaction associated=3-HYDROXYDECANOYL-ACP-DEHYDR-RXN|4.2.1.58-RXN|4.2.1.59-RXN|4.2.1.61-RXN|RXN-10061|RXN-10656|RXN-10660|RXN-11477|RXN-11481|RXN-16619|RXN-16623|RXN-16627|RXN-16631|RXN-9520|RXN-9533|RXN-9537|RXN-9557|RXN-9634|RXN-9655|RXN0-2144|RXN1G-1084|RXN1G-220|RXN1G-320|RXN1G-363|RXN1G-517}}
−
{{#set: common name=methylmalonate-semialdehyde_dehydrogenase}}
+
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-7664|PWY-6282|PWY-5973|PWY-5989|PWY-5971|PWYG-321|PWY-7663|PWY-5994|PWY3O-355|PWY0-862}}
−
{{#set: ec number=EC-1.2.1}}
+
−
{{#set: gene associated=Tiso_gene_11323}}
+
−
{{#set: in pathway=PWY-7574|BETA-ALA-DEGRADATION-I-PWY|P562-PWY|PWY-1781}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction source=annotation-in-silico_annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+

Revision as of 17:05, 21 March 2018

Gene Tiso_gene_6884

  • right end position:
    • 9260
  • transcription direction:
    • POSITIVE
  • left end position:
    • 7378
  • centisome position:
    • 62.93074
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/tisogem/index.php?title=A-2-oxoglutarate-dehydrogenase-E2-protei&oldid=38638"